Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 RNU4-78P-201ENST00000410940 126 ntBASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 MTCO1P21-201ENST00000416634 589 ntBASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 CYCSP4-201ENST00000429682 331 ntBASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 MTCYBP45-201ENST00000435243 565 ntBASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 RPL7P36-201ENST00000444633 681 ntBASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 AC006480.1-201ENST00000449887 378 ntBASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 SNRPFP4-201ENST00000456366 242 ntBASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 CEACAMP4-201ENST00000457676 421 ntBASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 AP001992.1-205ENST00000462248 379 ntBASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 RAC1P2-201ENST00000511164 579 ntBASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 AC010625.1-201ENST00000511296 403 ntBASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 AC093677.1-201ENST00000514414 678 ntBASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 DEFB131E-202ENST00000602581 683 ntBASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 AC048347.1-201ENST00000624621 427 ntBASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 AC233263.6-201ENST00000631132 1963 ntBASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.46□□□□□ -1.69
HDAC9Q9UKV0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HDAC9Q9UKV0 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 AL365440.1-201ENST00000436135 2167 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 RNU6-1181P-201ENST00000384191 106 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 RNU6-809P-201ENST00000384461 107 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 Y_RNA.517-201ENST00000384551 106 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 RNU6-821P-201ENST00000390995 107 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 RNU6-248P-201ENST00000410720 107 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 AC127526.1-201ENST00000417526 366 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 EZH2P1-201ENST00000431167 291 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 MTND1P34-201ENST00000438556 671 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 SNORA71B-202ENST00000439232 272 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 USP9YP12-201ENST00000450481 570 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 RPS24P6-201ENST00000452670 400 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 MTCYBP1-201ENST00000454315 1119 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 RPL21P104-201ENST00000464143 478 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 HMGB1P22-201ENST00000505315 124 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 MTND2P33-201ENST00000506452 1031 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 TXNP6-201ENST00000510190 310 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 RANP9-201ENST00000519957 271 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 AC007458.1-201ENST00000542812 373 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 AC011611.1-201ENST00000552179 197 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 MIR3690-201ENST00000580266 75 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 AL139395.1-201ENST00000603662 160 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 AL021997.1-201ENST00000605757 193 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 MIR7851-201ENST00000610611 160 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 AC138749.5-201ENST00000611461 208 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 AC087241.4-201ENST00000612441 480 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 AC116165.2-201ENST00000616705 206 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 AC233309.1-201ENST00000619522 751 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 AC026585.1-201ENST00000619582 524 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 AC068792.1-201ENST00000621354 417 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 CCT4P2-201ENST00000233836 1548 ntBASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
HDAC9Q9UKV0 EXOC5P1-201ENST00000510543 1969 ntBASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms