Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC025588.4-201ENST00000615802 908 ntBASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 AC009318.4-201ENST00000620496 486 ntBASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 UCA1.1-201ENST00000620952 75 ntBASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.18□□□□□ -2.06
VPS29Q9UBQ0 AC097714.1-201ENST00000511272 1647 ntBASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 AL136360.1-201ENST00000503377 1900 ntBASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 RNU6-252P-201ENST00000363232 107 ntBASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 RNA5SP27-201ENST00000363839 119 ntBASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 RNU6-461P-201ENST00000364195 107 ntBASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 SNORA36C-201ENST00000384289 132 ntBASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 AF274854.1-201ENST00000413236 615 ntBASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 AC107081.1-201ENST00000414975 361 ntBASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 PNRC2P1-201ENST00000423940 420 ntBASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 ARPC3P1-201ENST00000437218 533 ntBASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 AC018634.1-201ENST00000437554 401 ntBASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 snoU109.4-201ENST00000458953 143 ntBASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 AP001486.1-201ENST00000463339 476 ntBASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 RPL31P41-201ENST00000477967 372 ntBASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 AC023424.2-201ENST00000493479 777 ntBASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 AC087808.1-201ENST00000520501 361 ntBASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 MTCYBP20-201ENST00000524239 1129 ntBASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 ATP5F1P7-201ENST00000567330 760 ntBASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 AC025034.2-201ENST00000623264 286 ntBASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 AP006248.3-201ENST00000623580 594 ntBASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 AC025263.3-201ENST00000622965 1396 ntBASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 AL359693.1-201ENST00000614959 2407 ntBASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 NUP58P1-201ENST00000502546 1738 ntBASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 TPTE2P4-201ENST00000258589 1605 ntBASIC2.17□□□□□ -2.06
VPS29Q9UBQ0 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.16□□□□□ -2.06
VPS29Q9UBQ0 AC005336.3-201ENST00000623833 2679 ntBASIC2.16□□□□□ -2.06
VPS29Q9UBQ0 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.16□□□□□ -2.06
VPS29Q9UBQ0 AL139276.1-201ENST00000311910 1001 ntBASIC2.16□□□□□ -2.06
VPS29Q9UBQ0 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
VPS29Q9UBQ0 RNU1-105P-201ENST00000363470 161 ntBASIC2.16□□□□□ -2.06
VPS29Q9UBQ0 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.16□□□□□ -2.06
VPS29Q9UBQ0 AL122016.1-201ENST00000403365 367 ntBASIC2.16□□□□□ -2.06
VPS29Q9UBQ0 AL513475.1-201ENST00000406602 315 ntBASIC2.16□□□□□ -2.06
VPS29Q9UBQ0 AC234781.2-201ENST00000426370 994 ntBASIC2.16□□□□□ -2.06
VPS29Q9UBQ0 OR4K11P-201ENST00000431829 904 ntBASIC2.16□□□□□ -2.06
VPS29Q9UBQ0 OR52A4P-202ENST00000481634 799 ntBASIC2.16□□□□□ -2.06
VPS29Q9UBQ0 AC135721.1-201ENST00000497954 479 ntBASIC2.16□□□□□ -2.06
VPS29Q9UBQ0 OR52A4P-203ENST00000498233 1014 ntBASIC2.16□□□□□ -2.06
VPS29Q9UBQ0 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.16□□□□□ -2.06
VPS29Q9UBQ0 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.16□□□□□ -2.06
VPS29Q9UBQ0 RNU6-27P-201ENST00000516146 107 ntBASIC2.16□□□□□ -2.06
VPS29Q9UBQ0 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.16□□□□□ -2.06
VPS29Q9UBQ0 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.16□□□□□ -2.06
VPS29Q9UBQ0 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.16□□□□□ -2.06
VPS29Q9UBQ0 AC106782.4-201ENST00000568264 210 ntBASIC2.16□□□□□ -2.06
VPS29Q9UBQ0 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
VPS29Q9UBQ0 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.16□□□□□ -2.06
VPS29Q9UBQ0 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.16□□□□□ -2.06
VPS29Q9UBQ0 AL022099.1-201ENST00000604551 712 ntBASIC2.16□□□□□ -2.06
VPS29Q9UBQ0 AP000254.1-201ENST00000609934 520 ntBASIC2.16□□□□□ -2.06
VPS29Q9UBQ0 AL160394.1-201ENST00000624765 724 ntBASIC2.16□□□□□ -2.06
VPS29Q9UBQ0 AC243829.7-201ENST00000633081 225 ntBASIC2.16□□□□□ -2.06
VPS29Q9UBQ0 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
VPS29Q9UBQ0 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.16□□□□□ -2.06
VPS29Q9UBQ0 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
VPS29Q9UBQ0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.06
VPS29Q9UBQ0 Z99496.1-201ENST00000469424 1477 ntBASIC2.15□□□□□ -2.06
VPS29Q9UBQ0 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
VPS29Q9UBQ0 RNU6-1072P-201ENST00000384703 107 ntBASIC2.15□□□□□ -2.07
VPS29Q9UBQ0 RNU6-443P-201ENST00000384780 107 ntBASIC2.15□□□□□ -2.07
VPS29Q9UBQ0 RNU6-1197P-201ENST00000391183 107 ntBASIC2.15□□□□□ -2.07
VPS29Q9UBQ0 AL023807.1-201ENST00000407932 359 ntBASIC2.15□□□□□ -2.07
VPS29Q9UBQ0 UBE2V1P11-201ENST00000411559 285 ntBASIC2.15□□□□□ -2.07
VPS29Q9UBQ0 AC007064.1-201ENST00000412238 351 ntBASIC2.15□□□□□ -2.07
VPS29Q9UBQ0 AL365496.1-201ENST00000426885 215 ntBASIC2.15□□□□□ -2.07
VPS29Q9UBQ0 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.15□□□□□ -2.07
VPS29Q9UBQ0 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.15□□□□□ -2.07
VPS29Q9UBQ0 snoU13.28-201ENST00000459235 104 ntBASIC2.15□□□□□ -2.07
VPS29Q9UBQ0 AC090096.1-201ENST00000489168 390 ntBASIC2.15□□□□□ -2.07
VPS29Q9UBQ0 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.15□□□□□ -2.07
VPS29Q9UBQ0 AC113155.1-201ENST00000511141 769 ntBASIC2.15□□□□□ -2.07
VPS29Q9UBQ0 AC114781.4-201ENST00000513707 639 ntBASIC2.15□□□□□ -2.07
VPS29Q9UBQ0 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.15□□□□□ -2.07
VPS29Q9UBQ0 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.15□□□□□ -2.07
VPS29Q9UBQ0 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
VPS29Q9UBQ0 HMGB1P14-201ENST00000557424 591 ntBASIC2.15□□□□□ -2.07
VPS29Q9UBQ0 AC012414.2-201ENST00000559474 187 ntBASIC2.15□□□□□ -2.07
VPS29Q9UBQ0 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms