Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AL022099.1-201ENST00000604551 712 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 AC004853.1-201ENST00000604902 698 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 AC024933.1-201ENST00000608472 348 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 TUG1_1.1-201ENST00000610654 145 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 AL390240.1-201ENST00000612950 384 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 AL596245.1-201ENST00000618994 362 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 AL391262.2-201ENST00000622466 494 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 AC090897.3-201ENST00000636973 1157 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 MTND5P7-201ENST00000413558 1798 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 AL136164.4-201ENST00000625013 2135 ntBASIC2.63□□□□□ -1.99
CLCF1Q9UBD9 Y_RNA.192-201ENST00000363977 102 ntBASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 SNORA9.2-201ENST00000365361 133 ntBASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 RNU6-906P-201ENST00000384700 70 ntBASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 AL136372.1-201ENST00000403060 228 ntBASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 AL591034.1-201ENST00000407447 340 ntBASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 RPS15AP38-201ENST00000413110 372 ntBASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 AL592310.1-201ENST00000414330 671 ntBASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 TPMTP2-201ENST00000414372 726 ntBASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 SDCBPP3-201ENST00000419629 891 ntBASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 AL135938.1-201ENST00000443141 297 ntBASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 AL009048.1-201ENST00000450437 298 ntBASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 SSXP4-201ENST00000451349 245 ntBASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 RN7SL283P-201ENST00000489055 303 ntBASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 TPT1P8-201ENST00000510120 555 ntBASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 AC116353.3-201ENST00000511215 249 ntBASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 AC245166.1-201ENST00000521012 253 ntBASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 AC009712.1-201ENST00000564938 316 ntBASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 AC015871.2-201ENST00000603605 948 ntBASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 AL390208.1-201ENST00000605885 644 ntBASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 AC131235.4-201ENST00000609288 620 ntBASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 AL357080.1-201ENST00000617394 239 ntBASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 SCARNA15.3-201ENST00000626315 122 ntBASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 SCARNA4.1-201ENST00000628597 123 ntBASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 OR4G3P-201ENST00000633500 913 ntBASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 AC005539.1-201ENST00000443768 1479 ntBASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
CLCF1Q9UBD9 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 U3.6-201ENST00000363622 211 ntBASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 RNU6-882P-201ENST00000391025 103 ntBASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 MIR1284-201ENST00000408337 120 ntBASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 RNU6-584P-201ENST00000410350 95 ntBASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 OR2AS1P-201ENST00000427827 319 ntBASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 PTENP1-201ENST00000447117 1215 ntBASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 RPL37P4-201ENST00000448908 268 ntBASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 RNU7-136P-201ENST00000458819 69 ntBASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 RPS27AP1-201ENST00000475545 471 ntBASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 AC006483.1-201ENST00000487308 313 ntBASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 SCGB1D5P-201ENST00000515134 247 ntBASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 DEFB131D-201ENST00000526803 184 ntBASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 MED28P6-201ENST00000558776 231 ntBASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 AC005951.1-201ENST00000576706 485 ntBASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 MIR4506-201ENST00000584693 77 ntBASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 AC006504.3-201ENST00000586818 523 ntBASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 AC011458.1-201ENST00000604034 617 ntBASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 AC012443.1-201ENST00000605605 231 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms