Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.35□□□□□ -1.71
MKS1Q9NXB0 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.35□□□□□ -1.71
MKS1Q9NXB0 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
MKS1Q9NXB0 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.35□□□□□ -1.71
MKS1Q9NXB0 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.35□□□□□ -1.71
MKS1Q9NXB0 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.35□□□□□ -1.71
MKS1Q9NXB0 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.35□□□□□ -1.71
MKS1Q9NXB0 RPL36AP6-201ENST00000435770 321 ntBASIC4.35□□□□□ -1.71
MKS1Q9NXB0 MTATP6P23-201ENST00000440153 476 ntBASIC4.35□□□□□ -1.71
MKS1Q9NXB0 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.35□□□□□ -1.71
MKS1Q9NXB0 WASF1P1-201ENST00000447560 1131 ntBASIC4.35□□□□□ -1.71
MKS1Q9NXB0 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.35□□□□□ -1.71
MKS1Q9NXB0 RNU7-63P-201ENST00000459054 62 ntBASIC4.35□□□□□ -1.71
MKS1Q9NXB0 snoU13.20-201ENST00000459180 104 ntBASIC4.35□□□□□ -1.71
MKS1Q9NXB0 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.35□□□□□ -1.71
MKS1Q9NXB0 AC063943.1-201ENST00000465434 453 ntBASIC4.35□□□□□ -1.71
MKS1Q9NXB0 RN7SL432P-201ENST00000484057 298 ntBASIC4.35□□□□□ -1.71
MKS1Q9NXB0 RPS26P15-201ENST00000488067 348 ntBASIC4.35□□□□□ -1.71
MKS1Q9NXB0 NIPA2P2-201ENST00000496376 1083 ntBASIC4.35□□□□□ -1.71
MKS1Q9NXB0 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
MKS1Q9NXB0 AC005921.1-201ENST00000510589 286 ntBASIC4.35□□□□□ -1.71
MKS1Q9NXB0 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.35□□□□□ -1.71
MKS1Q9NXB0 RNU6-1073P-201ENST00000517182 106 ntBASIC4.35□□□□□ -1.71
MKS1Q9NXB0 RNU6-840P-201ENST00000517275 65 ntBASIC4.35□□□□□ -1.71
MKS1Q9NXB0 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.35□□□□□ -1.71
MKS1Q9NXB0 AP001922.4-201ENST00000526967 290 ntBASIC4.35□□□□□ -1.71
MKS1Q9NXB0 OR5BN1P-201ENST00000532955 829 ntBASIC4.35□□□□□ -1.71
MKS1Q9NXB0 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.35□□□□□ -1.71
MKS1Q9NXB0 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.35□□□□□ -1.71
MKS1Q9NXB0 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.35□□□□□ -1.71
MKS1Q9NXB0 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.35□□□□□ -1.71
MKS1Q9NXB0 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.35□□□□□ -1.71
MKS1Q9NXB0 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.35□□□□□ -1.71
MKS1Q9NXB0 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.35□□□□□ -1.71
MKS1Q9NXB0 AC093648.1-201ENST00000623546 606 ntBASIC4.35□□□□□ -1.71
MKS1Q9NXB0 AL133383.2-201ENST00000622958 2336 ntBASIC4.35□□□□□ -1.71
MKS1Q9NXB0 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
MKS1Q9NXB0 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
MKS1Q9NXB0 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
MKS1Q9NXB0 BDP1P-201ENST00000582658 1990 ntBASIC4.34□□□□□ -1.71
MKS1Q9NXB0 SDAD1P1-202ENST00000524156 2051 ntBASIC4.34□□□□□ -1.71
MKS1Q9NXB0 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
MKS1Q9NXB0 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
MKS1Q9NXB0 AL590240.1-201ENST00000334118 313 ntBASIC4.34□□□□□ -1.71
MKS1Q9NXB0 SNORD66.1-201ENST00000391230 76 ntBASIC4.34□□□□□ -1.71
MKS1Q9NXB0 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.34□□□□□ -1.71
MKS1Q9NXB0 AC016691.1-201ENST00000441321 413 ntBASIC4.34□□□□□ -1.71
MKS1Q9NXB0 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.34□□□□□ -1.71
MKS1Q9NXB0 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.34□□□□□ -1.71
MKS1Q9NXB0 RNU6-261P-201ENST00000459506 102 ntBASIC4.34□□□□□ -1.71
MKS1Q9NXB0 AC006512.1-201ENST00000468816 291 ntBASIC4.34□□□□□ -1.71
MKS1Q9NXB0 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
MKS1Q9NXB0 AC006517.1-201ENST00000480485 328 ntBASIC4.34□□□□□ -1.71
MKS1Q9NXB0 RPSAP50-201ENST00000481955 852 ntBASIC4.34□□□□□ -1.71
MKS1Q9NXB0 AC108860.1-201ENST00000484521 383 ntBASIC4.34□□□□□ -1.71
MKS1Q9NXB0 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.34□□□□□ -1.71
MKS1Q9NXB0 AC104164.2-201ENST00000496953 495 ntBASIC4.34□□□□□ -1.71
MKS1Q9NXB0 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.34□□□□□ -1.71
MKS1Q9NXB0 AC025554.1-201ENST00000505641 188 ntBASIC4.34□□□□□ -1.71
MKS1Q9NXB0 RNU6-835P-201ENST00000516974 104 ntBASIC4.34□□□□□ -1.71
MKS1Q9NXB0 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.34□□□□□ -1.71
MKS1Q9NXB0 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.34□□□□□ -1.71
MKS1Q9NXB0 NCAPGP2-201ENST00000557911 754 ntBASIC4.34□□□□□ -1.71
MKS1Q9NXB0 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.34□□□□□ -1.71
MKS1Q9NXB0 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.34□□□□□ -1.71
MKS1Q9NXB0 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.34□□□□□ -1.71
MKS1Q9NXB0 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.34□□□□□ -1.71
MKS1Q9NXB0 AC010591.1-201ENST00000603941 649 ntBASIC4.34□□□□□ -1.71
MKS1Q9NXB0 AL355810.1-201ENST00000614629 552 ntBASIC4.34□□□□□ -1.71
MKS1Q9NXB0 SDR42E1P2-201ENST00000614861 481 ntBASIC4.34□□□□□ -1.71
MKS1Q9NXB0 AC010133.1-201ENST00000615809 842 ntBASIC4.34□□□□□ -1.71
MKS1Q9NXB0 AC112200.1-201ENST00000625015 234 ntBASIC4.34□□□□□ -1.71
MKS1Q9NXB0 AC006065.6-201ENST00000625201 545 ntBASIC4.34□□□□□ -1.71
MKS1Q9NXB0 FER-210ENST00000628534 558 ntTSL 5 BASIC4.34□□□□□ -1.71
MKS1Q9NXB0 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
MKS1Q9NXB0 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
MKS1Q9NXB0 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.34□□□□□ -1.71
MKS1Q9NXB0 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.34□□□□□ -1.71
MKS1Q9NXB0 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
MKS1Q9NXB0 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
MKS1Q9NXB0 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
MKS1Q9NXB0 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
MKS1Q9NXB0 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
MKS1Q9NXB0 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
MKS1Q9NXB0 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
MKS1Q9NXB0 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
MKS1Q9NXB0 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
MKS1Q9NXB0 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
MKS1Q9NXB0 MTND5P17-201ENST00000418405 1603 ntBASIC4.33□□□□□ -1.72
MKS1Q9NXB0 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
MKS1Q9NXB0 Y_RNA.38-201ENST00000362617 102 ntBASIC4.33□□□□□ -1.72
MKS1Q9NXB0 SNORA69-201ENST00000383895 132 ntBASIC4.33□□□□□ -1.72
MKS1Q9NXB0 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
MKS1Q9NXB0 RNA5SP397-201ENST00000391323 118 ntBASIC4.33□□□□□ -1.72
MKS1Q9NXB0 AL591416.1-201ENST00000404015 867 ntBASIC4.33□□□□□ -1.72
MKS1Q9NXB0 RN7SKP285-201ENST00000410137 318 ntBASIC4.33□□□□□ -1.72
MKS1Q9NXB0 RPS20P14-201ENST00000412545 360 ntBASIC4.33□□□□□ -1.72
MKS1Q9NXB0 RPS12P10-201ENST00000427031 377 ntBASIC4.33□□□□□ -1.72
MKS1Q9NXB0 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.33□□□□□ -1.72
MKS1Q9NXB0 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms