Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC099063.3-201ENST00000642066 185 ntBASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
BLOC1S4Q9NUP1 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 SNORA62.3-201ENST00000365110 153 ntBASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 SNORA36C-201ENST00000384289 132 ntBASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 AL138878.1-201ENST00000405131 347 ntBASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 RPL23AP82-202ENST00000427528 469 ntBASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 ARF4P2-201ENST00000430209 526 ntBASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 MTCYBP39-201ENST00000437562 491 ntBASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 AC008264.1-201ENST00000447612 367 ntBASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 CENPBD1P1-201ENST00000464061 469 ntBASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 AC072039.1-201ENST00000477611 581 ntBASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 RNU6-798P-201ENST00000516912 103 ntBASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 AC013828.2-201ENST00000532487 235 ntBASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 MIR544B-201ENST00000582372 78 ntBASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 AP001004.1-201ENST00000582468 324 ntBASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 AC068313.1-201ENST00000604028 1008 ntBASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 AC106791.2-201ENST00000604680 391 ntBASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 AC018714.1-201ENST00000605028 208 ntBASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 AC004908.2-201ENST00000609090 574 ntBASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 AL603758.1-201ENST00000618654 241 ntBASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.77□□□□□ -1.81
BLOC1S4Q9NUP1 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 CR383658.2-201ENST00000547576 1525 ntBASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 SNORA23-201ENST00000365128 182 ntBASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 RNU6-769P-201ENST00000384407 104 ntBASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 MIR514A1-201ENST00000385133 98 ntBASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 AC126124.2-201ENST00000413542 321 ntBASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 HSFY4P-201ENST00000415994 1181 ntBASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 AL356968.1-201ENST00000416622 474 ntBASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 MTND1P20-201ENST00000430341 950 ntBASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 HIGD1AP11-201ENST00000438361 280 ntBASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 AC009237.8-201ENST00000445492 379 ntBASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 PDSS1P2-201ENST00000449397 678 ntBASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 AC010401.1-201ENST00000463867 348 ntBASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 AC004263.1-201ENST00000479327 332 ntBASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 RPL23AP41-201ENST00000484754 458 ntBASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 AC114967.1-201ENST00000504890 259 ntBASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 RN7SKP60-201ENST00000516985 239 ntBASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 AC124947.2-202ENST00000552735 133 ntBASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 AL355836.1-201ENST00000555951 870 ntBASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 MIR4444-1-201ENST00000581696 74 ntBASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 MIR4444-2-201ENST00000584390 74 ntBASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 U3.45-201ENST00000607547 219 ntBASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 U7.8-201ENST00000619968 63 ntBASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 AC021755.1-201ENST00000559747 1447 ntBASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 AL138713.1-201ENST00000624026 2130 ntBASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
BLOC1S4Q9NUP1 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.75□□□□□ -1.81
BLOC1S4Q9NUP1 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.75□□□□□ -1.81
BLOC1S4Q9NUP1 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
BLOC1S4Q9NUP1 AC006378.2-201ENST00000623178 2476 ntBASIC3.75□□□□□ -1.81
BLOC1S4Q9NUP1 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
BLOC1S4Q9NUP1 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.75□□□□□ -1.81
BLOC1S4Q9NUP1 MIR200C-201ENST00000384980 68 ntBASIC3.75□□□□□ -1.81
BLOC1S4Q9NUP1 RNA5SP38-201ENST00000410750 119 ntBASIC3.75□□□□□ -1.81
BLOC1S4Q9NUP1 RAP1BP1-201ENST00000412709 553 ntBASIC3.75□□□□□ -1.81
BLOC1S4Q9NUP1 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.75□□□□□ -1.81
BLOC1S4Q9NUP1 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.75□□□□□ -1.81
BLOC1S4Q9NUP1 BX679664.1-201ENST00000434429 253 ntBASIC3.75□□□□□ -1.81
BLOC1S4Q9NUP1 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.75□□□□□ -1.81
BLOC1S4Q9NUP1 AL162389.1-201ENST00000449233 177 ntBASIC3.75□□□□□ -1.81
BLOC1S4Q9NUP1 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.75□□□□□ -1.81
BLOC1S4Q9NUP1 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.75□□□□□ -1.81
BLOC1S4Q9NUP1 AC004801.2-202ENST00000463559 283 ntBASIC3.75□□□□□ -1.81
BLOC1S4Q9NUP1 RN7SL330P-201ENST00000469709 307 ntBASIC3.75□□□□□ -1.81
BLOC1S4Q9NUP1 RN7SL293P-201ENST00000481765 281 ntBASIC3.75□□□□□ -1.81
BLOC1S4Q9NUP1 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms