Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
BRF2Q9HAW0 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
BRF2Q9HAW0 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
BRF2Q9HAW0 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
BRF2Q9HAW0 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.64□□□□□ -1.83
BRF2Q9HAW0 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
BRF2Q9HAW0 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.63□□□□□ -1.83
BRF2Q9HAW0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
BRF2Q9HAW0 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
BRF2Q9HAW0 SPRR2C-201ENST00000290702 219 ntBASIC3.63□□□□□ -1.83
BRF2Q9HAW0 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
BRF2Q9HAW0 SNORA23-201ENST00000365128 182 ntBASIC3.63□□□□□ -1.83
BRF2Q9HAW0 AC068538.1-201ENST00000376856 336 ntBASIC3.63□□□□□ -1.83
BRF2Q9HAW0 SNORA3.3-201ENST00000408712 125 ntBASIC3.63□□□□□ -1.83
BRF2Q9HAW0 RN7SKP159-201ENST00000410657 292 ntBASIC3.63□□□□□ -1.83
BRF2Q9HAW0 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.63□□□□□ -1.83
BRF2Q9HAW0 AC008850.1-201ENST00000427546 362 ntBASIC3.63□□□□□ -1.83
BRF2Q9HAW0 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.63□□□□□ -1.83
BRF2Q9HAW0 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.63□□□□□ -1.83
BRF2Q9HAW0 RPL21P89-201ENST00000444021 467 ntBASIC3.63□□□□□ -1.83
BRF2Q9HAW0 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.63□□□□□ -1.83
BRF2Q9HAW0 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.63□□□□□ -1.83
BRF2Q9HAW0 MTND1P29-201ENST00000448112 647 ntBASIC3.63□□□□□ -1.83
BRF2Q9HAW0 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.63□□□□□ -1.83
BRF2Q9HAW0 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.63□□□□□ -1.83
BRF2Q9HAW0 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.63□□□□□ -1.83
BRF2Q9HAW0 RN7SKP83-201ENST00000516512 178 ntBASIC3.63□□□□□ -1.83
BRF2Q9HAW0 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.63□□□□□ -1.83
BRF2Q9HAW0 RPL21P5-201ENST00000554662 472 ntBASIC3.63□□□□□ -1.83
BRF2Q9HAW0 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.63□□□□□ -1.83
BRF2Q9HAW0 AC006960.3-201ENST00000561845 705 ntBASIC3.63□□□□□ -1.83
BRF2Q9HAW0 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.63□□□□□ -1.83
BRF2Q9HAW0 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.63□□□□□ -1.83
BRF2Q9HAW0 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.63□□□□□ -1.83
BRF2Q9HAW0 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.63□□□□□ -1.83
BRF2Q9HAW0 AC040904.1-201ENST00000590850 223 ntBASIC3.63□□□□□ -1.83
BRF2Q9HAW0 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.63□□□□□ -1.83
BRF2Q9HAW0 AL590392.1-201ENST00000604960 446 ntBASIC3.63□□□□□ -1.83
BRF2Q9HAW0 SNORA62.6-201ENST00000606322 83 ntBASIC3.63□□□□□ -1.83
BRF2Q9HAW0 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.63□□□□□ -1.83
BRF2Q9HAW0 AC010678.1-201ENST00000614118 713 ntBASIC3.63□□□□□ -1.83
BRF2Q9HAW0 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.63□□□□□ -1.83
BRF2Q9HAW0 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.63□□□□□ -1.83
BRF2Q9HAW0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
BRF2Q9HAW0 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
BRF2Q9HAW0 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
BRF2Q9HAW0 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
BRF2Q9HAW0 CUL1P1-201ENST00000509510 2425 ntBASIC3.62□□□□□ -1.83
BRF2Q9HAW0 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.62□□□□□ -1.83
BRF2Q9HAW0 ZNF807-201ENST00000328088 1707 ntBASIC3.62□□□□□ -1.83
BRF2Q9HAW0 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
BRF2Q9HAW0 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
BRF2Q9HAW0 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
BRF2Q9HAW0 SNORA36C-201ENST00000384289 132 ntBASIC3.62□□□□□ -1.83
BRF2Q9HAW0 RNA5SP424-201ENST00000390988 115 ntBASIC3.62□□□□□ -1.83
BRF2Q9HAW0 TXNP7-201ENST00000406296 293 ntBASIC3.62□□□□□ -1.83
BRF2Q9HAW0 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.62□□□□□ -1.83
BRF2Q9HAW0 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.62□□□□□ -1.83
BRF2Q9HAW0 AL117339.2-201ENST00000430475 180 ntBASIC3.62□□□□□ -1.83
BRF2Q9HAW0 SNRPEP4-201ENST00000435815 279 ntBASIC3.62□□□□□ -1.83
BRF2Q9HAW0 SETP5-201ENST00000437270 562 ntBASIC3.62□□□□□ -1.83
BRF2Q9HAW0 MTCO3P45-201ENST00000443036 613 ntBASIC3.62□□□□□ -1.83
BRF2Q9HAW0 MTCO1P19-201ENST00000443487 500 ntBASIC3.62□□□□□ -1.83
BRF2Q9HAW0 USP9YP29-201ENST00000445112 563 ntBASIC3.62□□□□□ -1.83
BRF2Q9HAW0 ELOCP30-201ENST00000447108 299 ntBASIC3.62□□□□□ -1.83
BRF2Q9HAW0 TPT1P12-201ENST00000448968 492 ntBASIC3.62□□□□□ -1.83
BRF2Q9HAW0 NANOGP10-201ENST00000453325 895 ntBASIC3.62□□□□□ -1.83
BRF2Q9HAW0 MTND2P24-201ENST00000453434 806 ntBASIC3.62□□□□□ -1.83
BRF2Q9HAW0 RPS15AP36-201ENST00000492022 382 ntBASIC3.62□□□□□ -1.83
BRF2Q9HAW0 RPL7P47-201ENST00000497299 556 ntBASIC3.62□□□□□ -1.83
BRF2Q9HAW0 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.62□□□□□ -1.83
BRF2Q9HAW0 NDUFB4P2-201ENST00000509515 391 ntBASIC3.62□□□□□ -1.83
BRF2Q9HAW0 CDC42P4-201ENST00000510507 563 ntBASIC3.62□□□□□ -1.83
BRF2Q9HAW0 RNA5SP208-201ENST00000516156 78 ntBASIC3.62□□□□□ -1.83
BRF2Q9HAW0 MIR2114-201ENST00000516645 80 ntBASIC3.62□□□□□ -1.83
BRF2Q9HAW0 MIR2116-201ENST00000517221 80 ntBASIC3.62□□□□□ -1.83
BRF2Q9HAW0 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.62□□□□□ -1.83
BRF2Q9HAW0 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.62□□□□□ -1.83
BRF2Q9HAW0 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.62□□□□□ -1.83
BRF2Q9HAW0 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.62□□□□□ -1.83
BRF2Q9HAW0 CYCSP30-201ENST00000546447 172 ntBASIC3.62□□□□□ -1.83
BRF2Q9HAW0 CCNG2P1-201ENST00000549521 1000 ntBASIC3.62□□□□□ -1.83
BRF2Q9HAW0 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.62□□□□□ -1.83
BRF2Q9HAW0 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.62□□□□□ -1.83
BRF2Q9HAW0 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.62□□□□□ -1.83
BRF2Q9HAW0 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.62□□□□□ -1.83
BRF2Q9HAW0 MIR3611-201ENST00000584484 83 ntBASIC3.62□□□□□ -1.83
BRF2Q9HAW0 AC009977.1-201ENST00000586015 570 ntBASIC3.62□□□□□ -1.83
BRF2Q9HAW0 KC877982.1-201ENST00000602313 470 ntBASIC3.62□□□□□ -1.83
BRF2Q9HAW0 AL606490.9-201ENST00000603331 271 ntBASIC3.62□□□□□ -1.83
BRF2Q9HAW0 AC083809.1-201ENST00000615051 472 ntBASIC3.62□□□□□ -1.83
BRF2Q9HAW0 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.62□□□□□ -1.83
BRF2Q9HAW0 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
BRF2Q9HAW0 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.62□□□□□ -1.83
BRF2Q9HAW0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
BRF2Q9HAW0 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.62□□□□□ -1.83
BRF2Q9HAW0 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
BRF2Q9HAW0 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
BRF2Q9HAW0 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.62□□□□□ -1.83
BRF2Q9HAW0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms