Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 snoU13.8-201ENST00000458890 104 ntBASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 AL163540.1-201ENST00000485382 386 ntBASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 HMGB3P15-201ENST00000507326 574 ntBASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 AC005741.1-201ENST00000511094 432 ntBASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 TTC39CP1-201ENST00000512513 755 ntBASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 RN7SKP46-201ENST00000515942 234 ntBASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 SUMO2P20-201ENST00000520803 283 ntBASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 FRG2DP-202ENST00000566967 323 ntBASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 AC018552.3-201ENST00000567416 561 ntBASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 AL627309.6-201ENST00000606857 840 ntBASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 AC103710.2-201ENST00000609912 942 ntBASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 AC000123.2-201ENST00000623124 461 ntBASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 AL133216.2-202ENST00000634512 349 ntBASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 HSPE1P11-201ENST00000339579 310 ntBASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 RN7SKP44-201ENST00000363602 316 ntBASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 RNU5A-8P-201ENST00000364102 114 ntBASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 RN7SKP280-201ENST00000364196 304 ntBASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 RNA5SP130-201ENST00000364431 114 ntBASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 Y_RNA.530-201ENST00000384587 101 ntBASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 AL592114.1-201ENST00000403842 483 ntBASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 MIR1911-201ENST00000410783 80 ntBASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 SNORA74C-2-201ENST00000411179 201 ntBASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 RPS3AP52-201ENST00000435639 297 ntBASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 AC104308.1-201ENST00000454621 333 ntBASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 RPL7L1P8-201ENST00000469911 741 ntBASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 AC022034.3-201ENST00000471393 478 ntBASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 AC126389.1-201ENST00000477436 290 ntBASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 AC012181.1-201ENST00000479895 423 ntBASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 RN7SL812P-201ENST00000493791 279 ntBASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 RPS27AP13-201ENST00000498403 237 ntBASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 FTH1P21-201ENST00000512179 511 ntBASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 AC011979.2-201ENST00000527568 352 ntBASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 AL163153.1-201ENST00000554223 283 ntBASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 RPL21P12-201ENST00000559810 515 ntBASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 AC060771.1-201ENST00000582031 164 ntBASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 AC006116.10-201ENST00000591836 581 ntBASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 CYP2C61P-201ENST00000604072 290 ntBASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 AL022099.1-201ENST00000604551 712 ntBASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 AC040896.1-201ENST00000613819 479 ntBASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 SAMMSON-213ENST00000641336 1521 ntBASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 AL138713.1-201ENST00000624026 2130 ntBASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.81□□□□□ -1.64
BCAS3Q9H6U6 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
BCAS3Q9H6U6 AC009313.2-201ENST00000417893 1941 ntBASIC4.8□□□□□ -1.64
BCAS3Q9H6U6 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
BCAS3Q9H6U6 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
BCAS3Q9H6U6 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
BCAS3Q9H6U6 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
BCAS3Q9H6U6 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
BCAS3Q9H6U6 SPRR2C-201ENST00000290702 219 ntBASIC4.8□□□□□ -1.64
BCAS3Q9H6U6 OR1S2-201ENST00000302592 978 ntBASIC4.8□□□□□ -1.64
BCAS3Q9H6U6 Y_RNA.133-201ENST00000363428 110 ntBASIC4.8□□□□□ -1.64
BCAS3Q9H6U6 U3.11-201ENST00000364476 212 ntBASIC4.8□□□□□ -1.64
BCAS3Q9H6U6 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.8□□□□□ -1.64
BCAS3Q9H6U6 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
BCAS3Q9H6U6 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.8□□□□□ -1.64
BCAS3Q9H6U6 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.8□□□□□ -1.64
BCAS3Q9H6U6 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms