Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
VCX3BQ9H321 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VCX3BQ9H321 RNU6-252P-201ENST00000363232 107 ntBASIC2.13□□□□□ -2.07
VCX3BQ9H321 RNU6-270P-201ENST00000364131 105 ntBASIC2.13□□□□□ -2.07
VCX3BQ9H321 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.13□□□□□ -2.07
VCX3BQ9H321 ZNF90P2-204ENST00000419323 1075 ntBASIC2.13□□□□□ -2.07
VCX3BQ9H321 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.13□□□□□ -2.07
VCX3BQ9H321 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC2.13□□□□□ -2.07
VCX3BQ9H321 SDR42E1P3-201ENST00000438345 502 ntBASIC2.13□□□□□ -2.07
VCX3BQ9H321 SDCBPP1-201ENST00000440192 890 ntBASIC2.13□□□□□ -2.07
VCX3BQ9H321 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.13□□□□□ -2.07
VCX3BQ9H321 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.13□□□□□ -2.07
VCX3BQ9H321 AC072039.1-201ENST00000477611 581 ntBASIC2.13□□□□□ -2.07
VCX3BQ9H321 AC015724.1-201ENST00000478577 156 ntBASIC2.13□□□□□ -2.07
VCX3BQ9H321 AC022447.3-201ENST00000506865 495 ntBASIC2.13□□□□□ -2.07
VCX3BQ9H321 AC118465.1-201ENST00000513820 1271 ntBASIC2.13□□□□□ -2.07
VCX3BQ9H321 RN7SKP24-201ENST00000515888 284 ntBASIC2.13□□□□□ -2.07
VCX3BQ9H321 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.13□□□□□ -2.07
VCX3BQ9H321 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.13□□□□□ -2.07
VCX3BQ9H321 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.13□□□□□ -2.07
VCX3BQ9H321 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.13□□□□□ -2.07
VCX3BQ9H321 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.13□□□□□ -2.07
VCX3BQ9H321 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.13□□□□□ -2.07
VCX3BQ9H321 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.13□□□□□ -2.07
VCX3BQ9H321 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC2.13□□□□□ -2.07
VCX3BQ9H321 AC022662.1-201ENST00000580252 331 ntBASIC2.13□□□□□ -2.07
VCX3BQ9H321 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.13□□□□□ -2.07
VCX3BQ9H321 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.13□□□□□ -2.07
VCX3BQ9H321 AC012254.4-201ENST00000588843 273 ntBASIC2.13□□□□□ -2.07
VCX3BQ9H321 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.13□□□□□ -2.07
VCX3BQ9H321 AC092954.1-201ENST00000609121 445 ntBASIC2.13□□□□□ -2.07
VCX3BQ9H321 DUXAP9-208ENST00000622815 614 ntBASIC2.13□□□□□ -2.07
VCX3BQ9H321 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.13□□□□□ -2.07
VCX3BQ9H321 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
VCX3BQ9H321 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
VCX3BQ9H321 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
VCX3BQ9H321 RNU6-444P-201ENST00000383988 108 ntBASIC2.12□□□□□ -2.07
VCX3BQ9H321 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.12□□□□□ -2.07
VCX3BQ9H321 AL359511.1-201ENST00000402970 211 ntBASIC2.12□□□□□ -2.07
VCX3BQ9H321 AC092745.2-202ENST00000411880 369 ntBASIC2.12□□□□□ -2.07
VCX3BQ9H321 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.12□□□□□ -2.07
VCX3BQ9H321 AC236972.1-201ENST00000433225 199 ntBASIC2.12□□□□□ -2.07
VCX3BQ9H321 RPS15AP28-201ENST00000435088 386 ntBASIC2.12□□□□□ -2.07
VCX3BQ9H321 RPL23AP7-203ENST00000449021 469 ntBASIC2.12□□□□□ -2.07
VCX3BQ9H321 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.12□□□□□ -2.07
VCX3BQ9H321 RPS20P24-201ENST00000457473 361 ntBASIC2.12□□□□□ -2.07
VCX3BQ9H321 AC055731.1-201ENST00000474387 401 ntBASIC2.12□□□□□ -2.07
VCX3BQ9H321 RN7SL274P-201ENST00000492268 272 ntBASIC2.12□□□□□ -2.07
VCX3BQ9H321 RNU1-45P-201ENST00000517191 141 ntBASIC2.12□□□□□ -2.07
VCX3BQ9H321 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.12□□□□□ -2.07
VCX3BQ9H321 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC2.12□□□□□ -2.07
VCX3BQ9H321 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
VCX3BQ9H321 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.12□□□□□ -2.07
VCX3BQ9H321 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.12□□□□□ -2.07
VCX3BQ9H321 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.12□□□□□ -2.07
VCX3BQ9H321 CYCSP39-201ENST00000565821 309 ntBASIC2.12□□□□□ -2.07
VCX3BQ9H321 AC068135.2-201ENST00000569293 1028 ntBASIC2.12□□□□□ -2.07
VCX3BQ9H321 AC078899.2-201ENST00000595282 212 ntBASIC2.12□□□□□ -2.07
VCX3BQ9H321 AC125494.3-201ENST00000602759 455 ntBASIC2.12□□□□□ -2.07
VCX3BQ9H321 ELOCP35-201ENST00000604289 336 ntBASIC2.12□□□□□ -2.07
VCX3BQ9H321 AC025588.2-201ENST00000604851 466 ntBASIC2.12□□□□□ -2.07
VCX3BQ9H321 AC004775.1-201ENST00000607389 753 ntBASIC2.12□□□□□ -2.07
VCX3BQ9H321 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
VCX3BQ9H321 AC024595.1-201ENST00000623088 387 ntBASIC2.12□□□□□ -2.07
VCX3BQ9H321 AL109659.3-201ENST00000624985 950 ntBASIC2.12□□□□□ -2.07
VCX3BQ9H321 AC092608.3-201ENST00000625017 386 ntBASIC2.12□□□□□ -2.07
VCX3BQ9H321 AL356118.1-201ENST00000635272 1078 ntBASIC2.12□□□□□ -2.07
VCX3BQ9H321 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
VCX3BQ9H321 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
VCX3BQ9H321 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
VCX3BQ9H321 AL354685.2-201ENST00000448218 1447 ntBASIC2.11□□□□□ -2.07
VCX3BQ9H321 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
VCX3BQ9H321 RNA5SP68-201ENST00000363885 119 ntBASIC2.11□□□□□ -2.07
VCX3BQ9H321 SNORA38.1-201ENST00000364172 131 ntBASIC2.11□□□□□ -2.07
VCX3BQ9H321 RNU6-441P-201ENST00000384545 106 ntBASIC2.11□□□□□ -2.07
VCX3BQ9H321 RNU6-220P-201ENST00000390919 107 ntBASIC2.11□□□□□ -2.07
VCX3BQ9H321 UBA52P6-201ENST00000399822 382 ntBASIC2.11□□□□□ -2.07
VCX3BQ9H321 RNU6-272P-201ENST00000411028 104 ntBASIC2.11□□□□□ -2.07
VCX3BQ9H321 RNA5SP270-201ENST00000411361 118 ntBASIC2.11□□□□□ -2.07
VCX3BQ9H321 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.11□□□□□ -2.07
VCX3BQ9H321 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.11□□□□□ -2.07
VCX3BQ9H321 FCF1P2-201ENST00000415284 583 ntBASIC2.11□□□□□ -2.07
VCX3BQ9H321 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.11□□□□□ -2.07
VCX3BQ9H321 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.11□□□□□ -2.07
VCX3BQ9H321 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.11□□□□□ -2.07
VCX3BQ9H321 AL590623.1-201ENST00000427864 105 ntBASIC2.11□□□□□ -2.07
VCX3BQ9H321 ZNF965P-201ENST00000432501 817 ntBASIC2.11□□□□□ -2.07
VCX3BQ9H321 FCF1P1-201ENST00000432690 571 ntBASIC2.11□□□□□ -2.07
VCX3BQ9H321 Z80107.1-201ENST00000436830 412 ntBASIC2.11□□□□□ -2.07
VCX3BQ9H321 AL451074.3-201ENST00000437709 472 ntBASIC2.11□□□□□ -2.07
VCX3BQ9H321 UBE2V1P5-201ENST00000440070 405 ntBASIC2.11□□□□□ -2.07
VCX3BQ9H321 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.11□□□□□ -2.07
VCX3BQ9H321 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.11□□□□□ -2.07
VCX3BQ9H321 KLF3P2-201ENST00000465138 268 ntBASIC2.11□□□□□ -2.07
VCX3BQ9H321 HMGB3P17-201ENST00000504195 649 ntBASIC2.11□□□□□ -2.07
VCX3BQ9H321 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.11□□□□□ -2.07
VCX3BQ9H321 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.11□□□□□ -2.07
VCX3BQ9H321 AC026436.1-201ENST00000510537 270 ntBASIC2.11□□□□□ -2.07
VCX3BQ9H321 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.11□□□□□ -2.07
VCX3BQ9H321 MRPS17P9-201ENST00000511924 393 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms