Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 DEFB108D-201ENST00000527787 222 ntBASIC3.22□□□□□ -1.89
CCSER1Q9C0I3 MIR3921-201ENST00000577308 85 ntBASIC3.22□□□□□ -1.89
CCSER1Q9C0I3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.22□□□□□ -1.89
CCSER1Q9C0I3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.22□□□□□ -1.89
CCSER1Q9C0I3 AC096947.1-201ENST00000603233 470 ntBASIC3.22□□□□□ -1.89
CCSER1Q9C0I3 DUXAP11-201ENST00000603858 526 ntBASIC3.22□□□□□ -1.89
CCSER1Q9C0I3 AC105148.1-201ENST00000604961 409 ntBASIC3.22□□□□□ -1.89
CCSER1Q9C0I3 AC024060.1-201ENST00000607052 494 ntBASIC3.22□□□□□ -1.89
CCSER1Q9C0I3 DUXAP10-204ENST00000612052 616 ntBASIC3.22□□□□□ -1.89
CCSER1Q9C0I3 AC243773.3-201ENST00000613270 256 ntBASIC3.22□□□□□ -1.89
CCSER1Q9C0I3 AC022509.4-201ENST00000621404 572 ntBASIC3.22□□□□□ -1.89
CCSER1Q9C0I3 AC073348.1-201ENST00000623002 331 ntBASIC3.22□□□□□ -1.89
CCSER1Q9C0I3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.22□□□□□ -1.89
CCSER1Q9C0I3 OR4G3P-201ENST00000633500 913 ntBASIC3.22□□□□□ -1.89
CCSER1Q9C0I3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CCSER1Q9C0I3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.22□□□□□ -1.89
CCSER1Q9C0I3 AC005539.1-201ENST00000443768 1479 ntBASIC3.22□□□□□ -1.89
CCSER1Q9C0I3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CCSER1Q9C0I3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.22□□□□□ -1.89
CCSER1Q9C0I3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.89
CCSER1Q9C0I3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 CD24P4-201ENST00000382840 243 ntBASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 MIR181B1-201ENST00000385240 110 ntBASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 RNU2-43P-201ENST00000410306 190 ntBASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 OR4K6P-201ENST00000416478 897 ntBASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 AC106883.1-201ENST00000418805 562 ntBASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 MTCO2P5-201ENST00000422621 426 ntBASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 RPL7P44-201ENST00000424827 742 ntBASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 AL590233.1-201ENST00000430017 456 ntBASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 MTCO1P53-201ENST00000441633 699 ntBASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 AC112653.1-201ENST00000443851 386 ntBASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 CBX3P3-201ENST00000508108 532 ntBASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 AL359273.1-201ENST00000510918 627 ntBASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 SCGB1D5P-201ENST00000515134 247 ntBASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 SCARNA13-201ENST00000516672 275 ntBASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 RN7SKP282-201ENST00000516824 299 ntBASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 SLC2A13P1-201ENST00000531560 322 ntBASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 AC015688.2-201ENST00000584523 262 ntBASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 VN1R92P-201ENST00000598511 928 ntBASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 AC012119.1-201ENST00000603184 222 ntBASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 AC106791.2-201ENST00000604680 391 ntBASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 AC023158.2-201ENST00000614876 543 ntBASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 ATP5A1P2-202ENST00000616464 443 ntBASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 AC011330.2-201ENST00000621680 635 ntBASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.21□□□□□ -1.9
CCSER1Q9C0I3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 GNG5P1-201ENST00000255500 204 ntBASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 FRG1BP-201ENST00000278882 761 ntBASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 snoZ40.1-201ENST00000364540 72 ntBASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 MIR493-201ENST00000385254 89 ntBASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 RPL5P18-201ENST00000406671 891 ntBASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 RNU2-47P-201ENST00000410649 186 ntBASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 SSXP9-201ENST00000417503 292 ntBASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 AL139132.1-201ENST00000431587 344 ntBASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 AC107083.1-201ENST00000439643 279 ntBASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 AC093156.1-201ENST00000440382 670 ntBASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 RAC1P7-201ENST00000445367 377 ntBASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 RPS29P26-201ENST00000477483 171 ntBASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 AC097462.2-201ENST00000504623 481 ntBASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 AC111000.2-201ENST00000507775 550 ntBASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 AP000857.1-201ENST00000532151 543 ntBASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 AC022080.3-201ENST00000544433 482 ntBASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 EIF4BP1-201ENST00000554881 351 ntBASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 AC090615.1-201ENST00000577519 154 ntBASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 MIR4506-201ENST00000584693 77 ntBASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 AL451007.1-201ENST00000595491 289 ntBASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 AC021749.1-201ENST00000604322 607 ntBASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 AC009237.15-201ENST00000610252 501 ntBASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 AC025588.4-201ENST00000615802 908 ntBASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 AC123767.1-202ENST00000620407 817 ntBASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 AP003122.6-201ENST00000623831 495 ntBASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 AC092593.1-201ENST00000515413 1815 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms