Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 RPL7P26-201ENST00000333817 754 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 Y_RNA.72-201ENST00000362894 103 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 Y_RNA.255-201ENST00000364581 97 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 RNU6-39P-201ENST00000384344 107 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 RNU6-516P-201ENST00000411381 104 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 CHIAP3-201ENST00000423668 1133 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 RPL23AP1-201ENST00000428990 471 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 RPL23AP89-201ENST00000439324 255 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 AC093019.1-201ENST00000443135 252 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 RPS17P13-201ENST00000448974 407 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 AC006480.1-201ENST00000449887 378 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 AC006512.1-201ENST00000468816 291 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 RN7SL585P-201ENST00000470538 280 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 AC078785.3-201ENST00000476607 425 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 AC017037.1-201ENST00000508460 471 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 MTND3P22-201ENST00000510932 243 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 SNORD60.2-201ENST00000516883 86 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 AP000827.1-201ENST00000527814 258 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 AP003385.6-201ENST00000531603 374 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 OR8L1P-201ENST00000534005 955 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 CR383656.7-201ENST00000548164 174 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 AC128657.1-201ENST00000549459 145 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 HMGB3P26-201ENST00000560051 582 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 AC011712.1-201ENST00000588959 234 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 AC005261.5-201ENST00000596280 355 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 AL353621.2-201ENST00000605340 133 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 RMST_9.1-201ENST00000619945 193 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 AL359697.1-201ENST00000624879 587 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 AC006020.1-201ENST00000420179 1854 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 EIF2AP4-201ENST00000424793 1781 ntBASIC4.04□□□□□ -1.76
AMBRA1Q9C0C7 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 Y_RNA.263-201ENST00000364659 114 ntBASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 RNU4-48P-201ENST00000365559 182 ntBASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 AL359837.1-201ENST00000381357 287 ntBASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 MIR558-201ENST00000384920 94 ntBASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 MT-TD-201ENST00000387419 68 ntBASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 AL354719.1-201ENST00000406535 843 ntBASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 RPL35AP22-201ENST00000436855 335 ntBASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 AL138799.3-201ENST00000438968 350 ntBASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 NUTF2P7-201ENST00000453086 375 ntBASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 AL163973.1-201ENST00000484753 577 ntBASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 RPS3AP50-201ENST00000487064 803 ntBASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 AC135721.1-201ENST00000497954 479 ntBASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 AC108145.1-201ENST00000503770 153 ntBASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 AC105417.1-201ENST00000514691 285 ntBASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 AP001781.1-201ENST00000530977 207 ntBASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 AC023575.1-201ENST00000580510 358 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms