Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AL161713.1-201ENST00000555538 145 ntBASIC2.59□□□□□ -1.99
SCAPERQ9BY12 WISP1-OT1-201ENST00000602893 642 ntBASIC2.59□□□□□ -1.99
SCAPERQ9BY12 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
SCAPERQ9BY12 AL353748.2-201ENST00000622148 471 ntBASIC2.59□□□□□ -1.99
SCAPERQ9BY12 AC092159.4-201ENST00000624944 550 ntBASIC2.59□□□□□ -1.99
SCAPERQ9BY12 AL391987.6-201ENST00000305671 199 ntBASIC2.59□□□□□ -2
SCAPERQ9BY12 RNU6-707P-201ENST00000364647 95 ntBASIC2.59□□□□□ -2
SCAPERQ9BY12 AC073464.3-201ENST00000422564 712 ntBASIC2.59□□□□□ -2
SCAPERQ9BY12 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.59□□□□□ -2
SCAPERQ9BY12 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.59□□□□□ -2
SCAPERQ9BY12 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.59□□□□□ -2
SCAPERQ9BY12 HMGN1P28-201ENST00000521340 364 ntBASIC2.59□□□□□ -2
SCAPERQ9BY12 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.59□□□□□ -2
SCAPERQ9BY12 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.58□□□□□ -2
SCAPERQ9BY12 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
SCAPERQ9BY12 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.58□□□□□ -2
SCAPERQ9BY12 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.58□□□□□ -2
SCAPERQ9BY12 AC068781.1-201ENST00000488231 618 ntBASIC2.58□□□□□ -2
SCAPERQ9BY12 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.58□□□□□ -2
SCAPERQ9BY12 OR4R1P-201ENST00000529879 463 ntBASIC2.58□□□□□ -2
SCAPERQ9BY12 AC068714.1-201ENST00000559623 800 ntBASIC2.58□□□□□ -2
SCAPERQ9BY12 SNORA4-201ENST00000584302 138 ntBASIC2.58□□□□□ -2
SCAPERQ9BY12 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.58□□□□□ -2
SCAPERQ9BY12 MIR6504-201ENST00000613520 61 ntBASIC2.58□□□□□ -2
SCAPERQ9BY12 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.58□□□□□ -2
SCAPERQ9BY12 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.58□□□□□ -2
SCAPERQ9BY12 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
SCAPERQ9BY12 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.57□□□□□ -2
SCAPERQ9BY12 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.57□□□□□ -2
SCAPERQ9BY12 SNORA16.1-201ENST00000364597 132 ntBASIC2.57□□□□□ -2
SCAPERQ9BY12 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.57□□□□□ -2
SCAPERQ9BY12 SNRPFP4-201ENST00000456366 242 ntBASIC2.57□□□□□ -2
SCAPERQ9BY12 AC109464.2-201ENST00000510242 943 ntBASIC2.57□□□□□ -2
SCAPERQ9BY12 AC007375.1-201ENST00000554513 578 ntBASIC2.57□□□□□ -2
SCAPERQ9BY12 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.57□□□□□ -2
SCAPERQ9BY12 MTND2P13-201ENST00000577438 1039 ntBASIC2.57□□□□□ -2
SCAPERQ9BY12 PPP1R2P5-201ENST00000457256 603 ntBASIC2.56□□□□□ -2
SCAPERQ9BY12 AL589935.2-201ENST00000616471 1231 ntBASIC2.56□□□□□ -2
SCAPERQ9BY12 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.56□□□□□ -2
SCAPERQ9BY12 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SCAPERQ9BY12 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SCAPERQ9BY12 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
SCAPERQ9BY12 SNORA67.1-201ENST00000364749 141 ntBASIC2.55□□□□□ -2
SCAPERQ9BY12 RNU4-52P-201ENST00000384209 138 ntBASIC2.55□□□□□ -2
SCAPERQ9BY12 XKRY2-201ENST00000442362 1093 ntBASIC2.55□□□□□ -2
SCAPERQ9BY12 HMGN2P13-201ENST00000476476 274 ntBASIC2.55□□□□□ -2
SCAPERQ9BY12 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.55□□□□□ -2
SCAPERQ9BY12 DUXAP4-201ENST00000603046 613 ntBASIC2.55□□□□□ -2
SCAPERQ9BY12 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC2.55□□□□□ -2
SCAPERQ9BY12 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC2.55□□□□□ -2
SCAPERQ9BY12 DUXAP9-208ENST00000622815 614 ntBASIC2.55□□□□□ -2
SCAPERQ9BY12 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.55□□□□□ -2
SCAPERQ9BY12 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SCAPERQ9BY12 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.54□□□□□ -2
SCAPERQ9BY12 AC233981.2-201ENST00000611524 1614 ntBASIC2.54□□□□□ -2
SCAPERQ9BY12 RNY1P14-201ENST00000384426 108 ntBASIC2.54□□□□□ -2
SCAPERQ9BY12 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.54□□□□□ -2
SCAPERQ9BY12 MTCO3P21-201ENST00000430791 643 ntBASIC2.54□□□□□ -2
SCAPERQ9BY12 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.54□□□□□ -2
SCAPERQ9BY12 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.54□□□□□ -2
SCAPERQ9BY12 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.54□□□□□ -2
SCAPERQ9BY12 AL137159.1-201ENST00000452808 512 ntBASIC2.54□□□□□ -2
SCAPERQ9BY12 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.54□□□□□ -2
SCAPERQ9BY12 RNU6-347P-201ENST00000516658 105 ntBASIC2.54□□□□□ -2
SCAPERQ9BY12 RN7SKP40-201ENST00000517211 242 ntBASIC2.54□□□□□ -2
SCAPERQ9BY12 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.54□□□□□ -2
SCAPERQ9BY12 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.54□□□□□ -2
SCAPERQ9BY12 MIR3935-201ENST00000583472 104 ntBASIC2.54□□□□□ -2
SCAPERQ9BY12 APOOP1-201ENST00000604695 592 ntBASIC2.54□□□□□ -2
SCAPERQ9BY12 AC024560.3-201ENST00000608482 349 ntBASIC2.54□□□□□ -2
SCAPERQ9BY12 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
SCAPERQ9BY12 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
SCAPERQ9BY12 MTND4P23-201ENST00000447723 1363 ntBASIC2.54□□□□□ -2
SCAPERQ9BY12 AP002907.1-201ENST00000606361 1430 ntBASIC2.54□□□□□ -2
SCAPERQ9BY12 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC2.53□□□□□ -2
SCAPERQ9BY12 HMGB1P10-201ENST00000395823 563 ntBASIC2.53□□□□□ -2
SCAPERQ9BY12 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.53□□□□□ -2
SCAPERQ9BY12 AL035405.1-201ENST00000400795 710 ntBASIC2.53□□□□□ -2
SCAPERQ9BY12 AC073264.1-201ENST00000411508 416 ntBASIC2.53□□□□□ -2
SCAPERQ9BY12 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC2.53□□□□□ -2
SCAPERQ9BY12 FO393414.1-201ENST00000428697 1184 ntBASIC2.53□□□□□ -2
SCAPERQ9BY12 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC2.53□□□□□ -2
SCAPERQ9BY12 TOMM22P6-201ENST00000465035 409 ntBASIC2.53□□□□□ -2
SCAPERQ9BY12 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.53□□□□□ -2
SCAPERQ9BY12 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.53□□□□□ -2
SCAPERQ9BY12 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.53□□□□□ -2
SCAPERQ9BY12 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.53□□□□□ -2
SCAPERQ9BY12 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.53□□□□□ -2
SCAPERQ9BY12 SYF2P1-201ENST00000550658 413 ntBASIC2.53□□□□□ -2
SCAPERQ9BY12 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.53□□□□□ -2
SCAPERQ9BY12 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SCAPERQ9BY12 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SCAPERQ9BY12 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.53□□□□□ -2
SCAPERQ9BY12 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.53□□□□□ -2
SCAPERQ9BY12 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.52□□□□□ -2.01
SCAPERQ9BY12 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SCAPERQ9BY12 POLHP1-201ENST00000411806 470 ntBASIC2.52□□□□□ -2.01
SCAPERQ9BY12 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.52□□□□□ -2.01
SCAPERQ9BY12 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.52□□□□□ -2.01
SCAPERQ9BY12 TOMM22P1-201ENST00000418578 312 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms