Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 OR5B10P-201ENST00000532869 642 ntBASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 AL391813.2-201ENST00000609113 322 ntBASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 OR6R2P-201ENST00000609216 300 ntBASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 AL158209.2-201ENST00000619266 216 ntBASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 AC015967.1-201ENST00000619893 476 ntBASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 AC073534.2-201ENST00000620377 381 ntBASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 AC095031.1-201ENST00000623685 672 ntBASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 LRRC77P-213ENST00000637727 880 ntBASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 IPO8P1-201ENST00000455509 3109 ntBASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 AC090337.1-201ENST00000579651 2074 ntBASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
PAAF1Q9BRP4 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
PAAF1Q9BRP4 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.77
PAAF1Q9BRP4 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 SNORD9-201ENST00000362566 104 ntBASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 RNU6-637P-201ENST00000384050 107 ntBASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 MIR490-201ENST00000384865 128 ntBASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 RNA5SP424-201ENST00000390988 115 ntBASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 GSTA9P-201ENST00000406231 611 ntBASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 MTND1P21-201ENST00000412991 285 ntBASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 ELOCP4-201ENST00000420090 333 ntBASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 PIGFP2-201ENST00000421400 651 ntBASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 RWDD4P2-201ENST00000426392 563 ntBASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 MTCO3P30-201ENST00000426425 670 ntBASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 AC104850.1-201ENST00000435940 476 ntBASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 RPL35AP22-201ENST00000436855 335 ntBASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 RPL5P30-201ENST00000465511 891 ntBASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 TRBV12-2-201ENST00000489763 344 ntBASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 KCTD9P5-201ENST00000504141 1170 ntBASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 AC110768.1-201ENST00000509222 400 ntBASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 AC026801.2-201ENST00000515352 425 ntBASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 RNU6-314P-201ENST00000516574 104 ntBASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 AC007458.1-201ENST00000542812 373 ntBASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 AC069240.1-201ENST00000548774 375 ntBASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 AC136619.2-201ENST00000563361 631 ntBASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 XIAPP1-201ENST00000603162 600 ntBASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 AC107304.1-201ENST00000604229 296 ntBASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 U3.45-201ENST00000607547 219 ntBASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 AC244258.1-201ENST00000637553 1071 ntBASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.96□□□□□ -1.78
PAAF1Q9BRP4 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 RNU5E-1-201ENST00000362477 120 ntBASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 RNU5A-8P-201ENST00000364102 114 ntBASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 MIR19A-201ENST00000384878 82 ntBASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 RNU2-62P-201ENST00000410868 191 ntBASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 UBE2V1P10-201ENST00000414685 269 ntBASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 AC245054.1-201ENST00000420944 258 ntBASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 AC244098.2-201ENST00000422068 99 ntBASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 AC092832.1-201ENST00000422934 400 ntBASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 AC137499.1-201ENST00000427602 88 ntBASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 AC087650.1-201ENST00000431445 468 ntBASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 MTND1P4-201ENST00000435196 415 ntBASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 TIMM9P1-201ENST00000436122 256 ntBASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 AL136380.1-201ENST00000447970 162 ntBASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 NDUFS5P3-201ENST00000450668 321 ntBASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 RNU7-59P-201ENST00000459101 61 ntBASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 RPS3AP50-201ENST00000487064 803 ntBASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 RPL9P6-201ENST00000492764 598 ntBASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 AL117351.2-201ENST00000513571 157 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms