Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.53□□□□□ -2.16
VPS25Q9BRG1 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.53□□□□□ -2.16
VPS25Q9BRG1 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC1.53□□□□□ -2.16
VPS25Q9BRG1 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC1.53□□□□□ -2.16
VPS25Q9BRG1 TEX41-209ENST00000451478 452 ntTSL 2 BASIC1.53□□□□□ -2.16
VPS25Q9BRG1 AC087884.1-201ENST00000469738 328 ntBASIC1.53□□□□□ -2.16
VPS25Q9BRG1 AC104108.1-201ENST00000509930 412 ntBASIC1.53□□□□□ -2.16
VPS25Q9BRG1 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC1.53□□□□□ -2.16
VPS25Q9BRG1 AC006499.2-201ENST00000513470 337 ntBASIC1.53□□□□□ -2.16
VPS25Q9BRG1 AC016550.3-201ENST00000515706 767 ntBASIC1.53□□□□□ -2.16
VPS25Q9BRG1 RNA5SP356-201ENST00000515972 94 ntBASIC1.53□□□□□ -2.16
VPS25Q9BRG1 RNU6-202P-201ENST00000515998 96 ntBASIC1.53□□□□□ -2.16
VPS25Q9BRG1 PSMA2P1-201ENST00000526365 646 ntBASIC1.53□□□□□ -2.16
VPS25Q9BRG1 AC111188.2-201ENST00000529697 1387 ntBASIC1.53□□□□□ -2.16
VPS25Q9BRG1 AC118273.2-201ENST00000532092 465 ntBASIC1.53□□□□□ -2.16
VPS25Q9BRG1 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.53□□□□□ -2.16
VPS25Q9BRG1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.53□□□□□ -2.16
VPS25Q9BRG1 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.53□□□□□ -2.16
VPS25Q9BRG1 AC018926.3-201ENST00000618841 406 ntBASIC1.53□□□□□ -2.16
VPS25Q9BRG1 AC026422.1-201ENST00000623961 452 ntBASIC1.53□□□□□ -2.16
VPS25Q9BRG1 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.53□□□□□ -2.16
VPS25Q9BRG1 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC1.53□□□□□ -2.16
VPS25Q9BRG1 AC009950.2-201ENST00000636548 183 ntBASIC1.53□□□□□ -2.16
VPS25Q9BRG1 MTCO1P12-201ENST00000414273 1543 ntBASIC1.52□□□□□ -2.17
VPS25Q9BRG1 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
VPS25Q9BRG1 SNORD62.1-201ENST00000362541 86 ntBASIC1.52□□□□□ -2.17
VPS25Q9BRG1 RNU6-1159P-201ENST00000362933 107 ntBASIC1.52□□□□□ -2.17
VPS25Q9BRG1 RNA5SP160-201ENST00000364866 120 ntBASIC1.52□□□□□ -2.17
VPS25Q9BRG1 MIR421-201ENST00000365696 85 ntBASIC1.52□□□□□ -2.17
VPS25Q9BRG1 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.52□□□□□ -2.17
VPS25Q9BRG1 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
VPS25Q9BRG1 RN7SKP263-201ENST00000411194 309 ntBASIC1.52□□□□□ -2.17
VPS25Q9BRG1 CASKP1-201ENST00000412870 582 ntBASIC1.52□□□□□ -2.17
VPS25Q9BRG1 AL161449.1-201ENST00000414531 1199 ntBASIC1.52□□□□□ -2.17
VPS25Q9BRG1 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.52□□□□□ -2.17
VPS25Q9BRG1 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC1.52□□□□□ -2.17
VPS25Q9BRG1 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.52□□□□□ -2.17
VPS25Q9BRG1 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.52□□□□□ -2.17
VPS25Q9BRG1 AC112653.1-201ENST00000443851 386 ntBASIC1.52□□□□□ -2.17
VPS25Q9BRG1 AC104073.1-201ENST00000451988 151 ntBASIC1.52□□□□□ -2.17
VPS25Q9BRG1 RPL21P134-201ENST00000453468 483 ntBASIC1.52□□□□□ -2.17
VPS25Q9BRG1 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC1.52□□□□□ -2.17
VPS25Q9BRG1 AC104164.3-201ENST00000467363 1258 ntBASIC1.52□□□□□ -2.17
VPS25Q9BRG1 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC1.52□□□□□ -2.17
VPS25Q9BRG1 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.52□□□□□ -2.17
VPS25Q9BRG1 RPL7P18-201ENST00000478965 734 ntBASIC1.52□□□□□ -2.17
VPS25Q9BRG1 AC004263.1-201ENST00000479327 332 ntBASIC1.52□□□□□ -2.17
VPS25Q9BRG1 AC107032.1-201ENST00000485945 480 ntBASIC1.52□□□□□ -2.17
VPS25Q9BRG1 SUMO2P6-201ENST00000505273 288 ntBASIC1.52□□□□□ -2.17
VPS25Q9BRG1 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.52□□□□□ -2.17
VPS25Q9BRG1 RNU1-45P-201ENST00000517191 141 ntBASIC1.52□□□□□ -2.17
VPS25Q9BRG1 AC007954.1-201ENST00000554198 494 ntBASIC1.52□□□□□ -2.17
VPS25Q9BRG1 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC1.52□□□□□ -2.17
VPS25Q9BRG1 MIR3921-201ENST00000577308 85 ntBASIC1.52□□□□□ -2.17
VPS25Q9BRG1 MIR3200-201ENST00000580767 85 ntBASIC1.52□□□□□ -2.17
VPS25Q9BRG1 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC1.52□□□□□ -2.17
VPS25Q9BRG1 AC138473.1-201ENST00000605717 526 ntBASIC1.52□□□□□ -2.17
VPS25Q9BRG1 AC013562.2-201ENST00000611632 603 ntBASIC1.52□□□□□ -2.17
VPS25Q9BRG1 AC244517.12-201ENST00000623581 663 ntBASIC1.52□□□□□ -2.17
VPS25Q9BRG1 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
VPS25Q9BRG1 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC1.52□□□□□ -2.17
VPS25Q9BRG1 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
VPS25Q9BRG1 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
VPS25Q9BRG1 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
VPS25Q9BRG1 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
VPS25Q9BRG1 ZNF702P-202ENST00000434269 1966 ntBASIC1.52□□□□□ -2.17
VPS25Q9BRG1 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
VPS25Q9BRG1 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC1.51□□□□□ -2.17
VPS25Q9BRG1 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
VPS25Q9BRG1 RNU6-670P-201ENST00000364312 104 ntBASIC1.51□□□□□ -2.17
VPS25Q9BRG1 AL138827.1-201ENST00000402666 306 ntBASIC1.51□□□□□ -2.17
VPS25Q9BRG1 AL356432.1-201ENST00000405809 419 ntBASIC1.51□□□□□ -2.17
VPS25Q9BRG1 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC1.51□□□□□ -2.17
VPS25Q9BRG1 AL009174.1-201ENST00000426577 416 ntBASIC1.51□□□□□ -2.17
VPS25Q9BRG1 MICF-203ENST00000432679 129 ntBASIC1.51□□□□□ -2.17
VPS25Q9BRG1 AC007389.2-201ENST00000434630 306 ntBASIC1.51□□□□□ -2.17
VPS25Q9BRG1 MTND4LP10-201ENST00000435146 291 ntBASIC1.51□□□□□ -2.17
VPS25Q9BRG1 AC104978.1-201ENST00000449387 391 ntBASIC1.51□□□□□ -2.17
VPS25Q9BRG1 AL121769.1-201ENST00000469473 401 ntBASIC1.51□□□□□ -2.17
VPS25Q9BRG1 AC025181.1-201ENST00000477507 416 ntBASIC1.51□□□□□ -2.17
VPS25Q9BRG1 SUMO1P1-201ENST00000497904 306 ntBASIC1.51□□□□□ -2.17
VPS25Q9BRG1 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.51□□□□□ -2.17
VPS25Q9BRG1 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.51□□□□□ -2.17
VPS25Q9BRG1 AC022447.1-201ENST00000515358 464 ntBASIC1.51□□□□□ -2.17
VPS25Q9BRG1 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.51□□□□□ -2.17
VPS25Q9BRG1 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.51□□□□□ -2.17
VPS25Q9BRG1 AC026403.1-201ENST00000518938 295 ntBASIC1.51□□□□□ -2.17
VPS25Q9BRG1 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.51□□□□□ -2.17
VPS25Q9BRG1 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.51□□□□□ -2.17
VPS25Q9BRG1 AL049838.1-201ENST00000563647 981 ntBASIC1.51□□□□□ -2.17
VPS25Q9BRG1 AC009314.1-201ENST00000603871 304 ntBASIC1.51□□□□□ -2.17
VPS25Q9BRG1 AL022099.1-201ENST00000604551 712 ntBASIC1.51□□□□□ -2.17
VPS25Q9BRG1 AL590099.1-201ENST00000615276 138 ntBASIC1.51□□□□□ -2.17
VPS25Q9BRG1 AC104307.1-201ENST00000616142 196 ntBASIC1.51□□□□□ -2.17
VPS25Q9BRG1 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
VPS25Q9BRG1 OR5H6-203ENST00000642105 978 ntBASIC1.51□□□□□ -2.17
VPS25Q9BRG1 AC096644.4-201ENST00000563417 2912 ntBASIC1.51□□□□□ -2.17
VPS25Q9BRG1 TAB3P1-202ENST00000452645 1634 ntBASIC1.51□□□□□ -2.17
VPS25Q9BRG1 OFD1P5Y-201ENST00000447585 2590 ntBASIC1.51□□□□□ -2.17
VPS25Q9BRG1 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms