Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.05□□□□□ -1.92
SSX3Q99909 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.05□□□□□ -1.92
SSX3Q99909 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.05□□□□□ -1.92
SSX3Q99909 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.05□□□□□ -1.92
SSX3Q99909 AC087276.1-201ENST00000529659 480 ntBASIC3.05□□□□□ -1.92
SSX3Q99909 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SSX3Q99909 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.05□□□□□ -1.92
SSX3Q99909 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.05□□□□□ -1.92
SSX3Q99909 SETP2-201ENST00000553886 926 ntBASIC3.05□□□□□ -1.92
SSX3Q99909 AC074050.1-201ENST00000563247 211 ntBASIC3.05□□□□□ -1.92
SSX3Q99909 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.05□□□□□ -1.92
SSX3Q99909 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.05□□□□□ -1.92
SSX3Q99909 MIR5187-201ENST00000583479 76 ntBASIC3.05□□□□□ -1.92
SSX3Q99909 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.05□□□□□ -1.92
SSX3Q99909 VN1R90P-201ENST00000595717 726 ntBASIC3.05□□□□□ -1.92
SSX3Q99909 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.05□□□□□ -1.92
SSX3Q99909 AC018714.1-201ENST00000605028 208 ntBASIC3.05□□□□□ -1.92
SSX3Q99909 AC103710.4-201ENST00000609301 899 ntBASIC3.05□□□□□ -1.92
SSX3Q99909 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.05□□□□□ -1.92
SSX3Q99909 AC131159.1-201ENST00000621854 213 ntBASIC3.05□□□□□ -1.92
SSX3Q99909 AC243312.2-201ENST00000623340 601 ntBASIC3.05□□□□□ -1.92
SSX3Q99909 AC079597.1-201ENST00000624306 508 ntBASIC3.05□□□□□ -1.92
SSX3Q99909 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
SSX3Q99909 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SSX3Q99909 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SSX3Q99909 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SSX3Q99909 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.05□□□□□ -1.92
SSX3Q99909 ZNF285B-201ENST00000561698 1767 ntBASIC3.05□□□□□ -1.92
SSX3Q99909 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.04□□□□□ -1.92
SSX3Q99909 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
SSX3Q99909 RNU1-75P-201ENST00000347264 129 ntBASIC3.04□□□□□ -1.92
SSX3Q99909 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SSX3Q99909 RNU6-637P-201ENST00000384050 107 ntBASIC3.04□□□□□ -1.92
SSX3Q99909 U8.11-201ENST00000384699 133 ntBASIC3.04□□□□□ -1.92
SSX3Q99909 U8.12-201ENST00000384701 133 ntBASIC3.04□□□□□ -1.92
SSX3Q99909 MIR1305-201ENST00000408300 86 ntBASIC3.04□□□□□ -1.92
SSX3Q99909 RNA5SP293-201ENST00000410527 113 ntBASIC3.04□□□□□ -1.92
SSX3Q99909 HMGB1P11-201ENST00000413899 637 ntBASIC3.04□□□□□ -1.92
SSX3Q99909 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.04□□□□□ -1.92
SSX3Q99909 SDCBPP3-201ENST00000419629 891 ntBASIC3.04□□□□□ -1.92
SSX3Q99909 AC005005.2-201ENST00000420779 380 ntBASIC3.04□□□□□ -1.92
SSX3Q99909 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.04□□□□□ -1.92
SSX3Q99909 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.04□□□□□ -1.92
SSX3Q99909 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.04□□□□□ -1.92
SSX3Q99909 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.04□□□□□ -1.92
SSX3Q99909 U8.18-201ENST00000459285 133 ntBASIC3.04□□□□□ -1.92
SSX3Q99909 AC004263.1-201ENST00000479327 332 ntBASIC3.04□□□□□ -1.92
SSX3Q99909 AL049874.1-201ENST00000489560 388 ntBASIC3.04□□□□□ -1.92
SSX3Q99909 TRBV12-2-201ENST00000489763 344 ntBASIC3.04□□□□□ -1.92
SSX3Q99909 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.04□□□□□ -1.92
SSX3Q99909 LTV1P1-201ENST00000510683 1237 ntBASIC3.04□□□□□ -1.92
SSX3Q99909 RNU1-95P-201ENST00000516357 160 ntBASIC3.04□□□□□ -1.92
SSX3Q99909 RNU1-128P-201ENST00000516704 160 ntBASIC3.04□□□□□ -1.92
SSX3Q99909 RNU6-678P-201ENST00000516832 109 ntBASIC3.04□□□□□ -1.92
SSX3Q99909 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.04□□□□□ -1.92
SSX3Q99909 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.04□□□□□ -1.92
SSX3Q99909 AP000926.4-201ENST00000527351 454 ntBASIC3.04□□□□□ -1.92
SSX3Q99909 AP004247.1-201ENST00000531556 1289 ntBASIC3.04□□□□□ -1.92
SSX3Q99909 AC013828.2-201ENST00000532487 235 ntBASIC3.04□□□□□ -1.92
SSX3Q99909 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.04□□□□□ -1.92
SSX3Q99909 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.04□□□□□ -1.92
SSX3Q99909 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.04□□□□□ -1.92
SSX3Q99909 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.04□□□□□ -1.92
SSX3Q99909 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.04□□□□□ -1.92
SSX3Q99909 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.04□□□□□ -1.92
SSX3Q99909 BNIP3P33-201ENST00000598912 569 ntBASIC3.04□□□□□ -1.92
SSX3Q99909 AC079089.3-201ENST00000603094 673 ntBASIC3.04□□□□□ -1.92
SSX3Q99909 AL357094.1-201ENST00000603845 844 ntBASIC3.04□□□□□ -1.92
SSX3Q99909 AC004067.1-201ENST00000608733 700 ntBASIC3.04□□□□□ -1.92
SSX3Q99909 AC009268.2-201ENST00000621925 457 ntBASIC3.04□□□□□ -1.92
SSX3Q99909 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.04□□□□□ -1.92
SSX3Q99909 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.04□□□□□ -1.92
SSX3Q99909 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
SSX3Q99909 AC012442.3-202ENST00000636742 206 ntBASIC3.04□□□□□ -1.92
SSX3Q99909 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.04□□□□□ -1.92
SSX3Q99909 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
SSX3Q99909 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SSX3Q99909 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.04□□□□□ -1.92
SSX3Q99909 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SSX3Q99909 MTND4P16-201ENST00000466108 1367 ntBASIC3.03□□□□□ -1.92
SSX3Q99909 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.03□□□□□ -1.92
SSX3Q99909 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
SSX3Q99909 RNU6-283P-201ENST00000364788 107 ntBASIC3.03□□□□□ -1.92
SSX3Q99909 RNU6-76P-201ENST00000384060 104 ntBASIC3.03□□□□□ -1.92
SSX3Q99909 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
SSX3Q99909 RPL21P17-201ENST00000397467 475 ntBASIC3.03□□□□□ -1.92
SSX3Q99909 MIR1290-201ENST00000408735 78 ntBASIC3.03□□□□□ -1.92
SSX3Q99909 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.03□□□□□ -1.92
SSX3Q99909 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.03□□□□□ -1.92
SSX3Q99909 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.03□□□□□ -1.92
SSX3Q99909 AL035423.1-201ENST00000420331 213 ntBASIC3.03□□□□□ -1.92
SSX3Q99909 AL389915.1-201ENST00000422463 466 ntBASIC3.03□□□□□ -1.92
SSX3Q99909 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.03□□□□□ -1.92
SSX3Q99909 MTND5P2-201ENST00000442927 1142 ntBASIC3.03□□□□□ -1.92
SSX3Q99909 OR6K1P-201ENST00000456766 971 ntBASIC3.03□□□□□ -1.92
SSX3Q99909 AC084357.1-201ENST00000473404 255 ntBASIC3.03□□□□□ -1.92
SSX3Q99909 AC114967.1-201ENST00000504890 259 ntBASIC3.03□□□□□ -1.92
SSX3Q99909 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
SSX3Q99909 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.03□□□□□ -1.92
SSX3Q99909 RAC1P5-201ENST00000512182 576 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms