Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.63□□□□□ -1.99
CDX2Q99626 AC091860.1-201ENST00000505723 432 ntBASIC2.63□□□□□ -1.99
CDX2Q99626 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.63□□□□□ -1.99
CDX2Q99626 RNU6-295P-201ENST00000516901 104 ntBASIC2.63□□□□□ -1.99
CDX2Q99626 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.63□□□□□ -1.99
CDX2Q99626 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.63□□□□□ -1.99
CDX2Q99626 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.63□□□□□ -1.99
CDX2Q99626 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CDX2Q99626 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.63□□□□□ -1.99
CDX2Q99626 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.63□□□□□ -1.99
CDX2Q99626 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.63□□□□□ -1.99
CDX2Q99626 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.63□□□□□ -1.99
CDX2Q99626 ZNF971P-201ENST00000562068 1249 ntBASIC2.63□□□□□ -1.99
CDX2Q99626 MTND4LP25-201ENST00000570218 163 ntBASIC2.63□□□□□ -1.99
CDX2Q99626 AC074051.3-201ENST00000570238 358 ntBASIC2.63□□□□□ -1.99
CDX2Q99626 RPL23AP84-201ENST00000571193 464 ntBASIC2.63□□□□□ -1.99
CDX2Q99626 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.63□□□□□ -1.99
CDX2Q99626 MIR4506-201ENST00000584693 77 ntBASIC2.63□□□□□ -1.99
CDX2Q99626 AC092474.3-201ENST00000603022 568 ntBASIC2.63□□□□□ -1.99
CDX2Q99626 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.63□□□□□ -1.99
CDX2Q99626 VN1R7P-201ENST00000619242 903 ntBASIC2.63□□□□□ -1.99
CDX2Q99626 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.63□□□□□ -1.99
CDX2Q99626 MTND5P7-201ENST00000413558 1798 ntBASIC2.63□□□□□ -1.99
CDX2Q99626 AC130650.2-201ENST00000618736 2403 ntBASIC2.63□□□□□ -1.99
CDX2Q99626 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.63□□□□□ -1.99
CDX2Q99626 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CDX2Q99626 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CDX2Q99626 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CDX2Q99626 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CDX2Q99626 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
CDX2Q99626 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.62□□□□□ -1.99
CDX2Q99626 MIR337-201ENST00000362281 93 ntBASIC2.62□□□□□ -1.99
CDX2Q99626 RNU6-989P-201ENST00000362756 107 ntBASIC2.62□□□□□ -1.99
CDX2Q99626 Y_RNA.122-201ENST00000363331 96 ntBASIC2.62□□□□□ -1.99
CDX2Q99626 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CDX2Q99626 SNORD116-23-201ENST00000384645 92 ntBASIC2.62□□□□□ -1.99
CDX2Q99626 MIR518E-201ENST00000385252 88 ntBASIC2.62□□□□□ -1.99
CDX2Q99626 MIR1250-201ENST00000408098 113 ntBASIC2.62□□□□□ -1.99
CDX2Q99626 AC109780.2-201ENST00000413467 845 ntBASIC2.62□□□□□ -1.99
CDX2Q99626 UBE2V1P9-201ENST00000414760 368 ntBASIC2.62□□□□□ -1.99
CDX2Q99626 TAF13P2-201ENST00000416876 286 ntBASIC2.62□□□□□ -1.99
CDX2Q99626 FNDC3CP-201ENST00000420795 1155 ntBASIC2.62□□□□□ -1.99
CDX2Q99626 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.62□□□□□ -1.99
CDX2Q99626 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.62□□□□□ -1.99
CDX2Q99626 AL353729.1-201ENST00000425044 720 ntBASIC2.62□□□□□ -1.99
CDX2Q99626 AC011816.1-201ENST00000441346 546 ntBASIC2.62□□□□□ -1.99
CDX2Q99626 TAF9P1-201ENST00000445421 515 ntBASIC2.62□□□□□ -1.99
CDX2Q99626 AC007677.1-201ENST00000445757 515 ntBASIC2.62□□□□□ -1.99
CDX2Q99626 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.62□□□□□ -1.99
CDX2Q99626 HMGN1P5-201ENST00000448591 263 ntBASIC2.62□□□□□ -1.99
CDX2Q99626 RPL36AP33-201ENST00000450395 310 ntBASIC2.62□□□□□ -1.99
CDX2Q99626 TAF9P2-201ENST00000454958 515 ntBASIC2.62□□□□□ -1.99
CDX2Q99626 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.62□□□□□ -1.99
CDX2Q99626 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.62□□□□□ -1.99
CDX2Q99626 AC026414.1-201ENST00000504046 698 ntBASIC2.62□□□□□ -1.99
CDX2Q99626 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.62□□□□□ -1.99
CDX2Q99626 AC118282.2-201ENST00000508739 374 ntBASIC2.62□□□□□ -1.99
CDX2Q99626 MTCYBP37-201ENST00000510642 1133 ntBASIC2.62□□□□□ -1.99
CDX2Q99626 MTCO3P27-201ENST00000514397 196 ntBASIC2.62□□□□□ -1.99
CDX2Q99626 RNA5SP385-201ENST00000515947 110 ntBASIC2.62□□□□□ -1.99
CDX2Q99626 RNA5SP135-201ENST00000517019 125 ntBASIC2.62□□□□□ -1.99
CDX2Q99626 AC245166.1-201ENST00000521012 253 ntBASIC2.62□□□□□ -1.99
CDX2Q99626 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.62□□□□□ -1.99
CDX2Q99626 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.62□□□□□ -1.99
CDX2Q99626 OR4R2P-201ENST00000530815 597 ntBASIC2.62□□□□□ -1.99
CDX2Q99626 AC006518.2-201ENST00000542513 940 ntBASIC2.62□□□□□ -1.99
CDX2Q99626 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.62□□□□□ -1.99
CDX2Q99626 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.62□□□□□ -1.99
CDX2Q99626 ISCA1P3-201ENST00000577104 373 ntBASIC2.62□□□□□ -1.99
CDX2Q99626 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.62□□□□□ -1.99
CDX2Q99626 MAGOH2P-202ENST00000584384 429 ntBASIC2.62□□□□□ -1.99
CDX2Q99626 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.62□□□□□ -1.99
CDX2Q99626 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.62□□□□□ -1.99
CDX2Q99626 AC002487.1-201ENST00000604565 994 ntBASIC2.62□□□□□ -1.99
CDX2Q99626 AC010338.1-201ENST00000621823 717 ntBASIC2.62□□□□□ -1.99
CDX2Q99626 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.61□□□□□ -1.99
CDX2Q99626 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CDX2Q99626 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CDX2Q99626 AC022336.2-201ENST00000568966 2538 ntBASIC2.61□□□□□ -1.99
CDX2Q99626 RNU6-251P-201ENST00000363235 104 ntBASIC2.61□□□□□ -1.99
CDX2Q99626 U3.6-201ENST00000363622 211 ntBASIC2.61□□□□□ -1.99
CDX2Q99626 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CDX2Q99626 MIR7-2-201ENST00000384970 110 ntBASIC2.61□□□□□ -1.99
CDX2Q99626 SNORA26.9-201ENST00000391322 122 ntBASIC2.61□□□□□ -1.99
CDX2Q99626 AL121978.1-201ENST00000402778 359 ntBASIC2.61□□□□□ -1.99
CDX2Q99626 NDUFB4P5-201ENST00000415445 361 ntBASIC2.61□□□□□ -1.99
CDX2Q99626 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.61□□□□□ -1.99
CDX2Q99626 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.61□□□□□ -1.99
CDX2Q99626 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.61□□□□□ -1.99
CDX2Q99626 Z98742.2-201ENST00000431564 187 ntBASIC2.61□□□□□ -1.99
CDX2Q99626 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.61□□□□□ -1.99
CDX2Q99626 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.61□□□□□ -1.99
CDX2Q99626 ELOCP13-201ENST00000443934 329 ntBASIC2.61□□□□□ -1.99
CDX2Q99626 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.61□□□□□ -1.99
CDX2Q99626 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.61□□□□□ -1.99
CDX2Q99626 SNRPGP9-201ENST00000456025 225 ntBASIC2.61□□□□□ -1.99
CDX2Q99626 AL024509.2-201ENST00000493462 493 ntBASIC2.61□□□□□ -1.99
CDX2Q99626 AC093801.2-201ENST00000503966 1050 ntBASIC2.61□□□□□ -1.99
CDX2Q99626 AC011352.3-201ENST00000505162 593 ntBASIC2.61□□□□□ -1.99
CDX2Q99626 ARL4AP2-201ENST00000507378 601 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms