Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AC093084.1-201ENST00000424233 687 ntBASIC1.39□□□□□ -2.19
SPENQ96T58 MTND1P18-201ENST00000448191 573 ntBASIC1.39□□□□□ -2.19
SPENQ96T58 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SPENQ96T58 CD69-203ENST00000536709 1020 ntTSL 2 BASIC1.39□□□□□ -2.19
SPENQ96T58 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.39□□□□□ -2.19
SPENQ96T58 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC1.39□□□□□ -2.19
SPENQ96T58 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
SPENQ96T58 RNA5SP181-201ENST00000410246 98 ntBASIC1.39□□□□□ -2.19
SPENQ96T58 BX510359.4-201ENST00000423750 193 ntBASIC1.39□□□□□ -2.19
SPENQ96T58 RPL34P26-201ENST00000445636 354 ntBASIC1.39□□□□□ -2.19
SPENQ96T58 AC022790.1-201ENST00000522872 204 ntBASIC1.39□□□□□ -2.19
SPENQ96T58 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SPENQ96T58 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SPENQ96T58 NUP58P1-201ENST00000502546 1738 ntBASIC1.39□□□□□ -2.19
SPENQ96T58 AC091152.2-201ENST00000591628 2569 ntBASIC1.38□□□□□ -2.19
SPENQ96T58 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.38□□□□□ -2.19
SPENQ96T58 HMGB1P45-201ENST00000435986 653 ntBASIC1.38□□□□□ -2.19
SPENQ96T58 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.38□□□□□ -2.19
SPENQ96T58 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.38□□□□□ -2.19
SPENQ96T58 AC090255.1-201ENST00000495779 349 ntBASIC1.38□□□□□ -2.19
SPENQ96T58 AC087854.1-201ENST00000519706 414 ntBASIC1.38□□□□□ -2.19
SPENQ96T58 AC241377.1-201ENST00000619797 406 ntBASIC1.38□□□□□ -2.19
SPENQ96T58 AL138785.1-201ENST00000425821 331 ntBASIC1.38□□□□□ -2.19
SPENQ96T58 AL645568.3-201ENST00000433683 316 ntBASIC1.38□□□□□ -2.19
SPENQ96T58 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.38□□□□□ -2.19
SPENQ96T58 AC084851.1-201ENST00000529105 249 ntBASIC1.38□□□□□ -2.19
SPENQ96T58 5S_rRNA.12-201ENST00000617631 107 ntBASIC1.38□□□□□ -2.19
SPENQ96T58 FTH1P12-201ENST00000432137 551 ntBASIC1.38□□□□□ -2.19
SPENQ96T58 AC108078.1-201ENST00000508073 725 ntBASIC1.38□□□□□ -2.19
SPENQ96T58 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.38□□□□□ -2.19
SPENQ96T58 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.38□□□□□ -2.19
SPENQ96T58 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.38□□□□□ -2.19
SPENQ96T58 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.38□□□□□ -2.19
SPENQ96T58 FAM106DP-201ENST00000586416 501 ntBASIC1.38□□□□□ -2.19
SPENQ96T58 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
SPENQ96T58 AL359851.1-201ENST00000569460 4997 ntBASIC1.38□□□□□ -2.19
SPENQ96T58 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC1.38□□□□□ -2.19
SPENQ96T58 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.37□□□□□ -2.19
SPENQ96T58 AC107015.1-201ENST00000466902 747 ntBASIC1.37□□□□□ -2.19
SPENQ96T58 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC1.37□□□□□ -2.19
SPENQ96T58 FABP5P6-201ENST00000510588 409 ntBASIC1.37□□□□□ -2.19
SPENQ96T58 TBCAP3-201ENST00000512475 312 ntBASIC1.37□□□□□ -2.19
SPENQ96T58 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC1.37□□□□□ -2.19
SPENQ96T58 AC034268.2-201ENST00000571784 482 ntBASIC1.37□□□□□ -2.19
SPENQ96T58 KATNBL1P1-201ENST00000605192 748 ntBASIC1.37□□□□□ -2.19
SPENQ96T58 AC138649.5-201ENST00000637456 137 ntBASIC1.37□□□□□ -2.19
SPENQ96T58 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.37□□□□□ -2.19
SPENQ96T58 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SPENQ96T58 AC092881.1-201ENST00000638218 2733 ntBASIC1.37□□□□□ -2.19
SPENQ96T58 RNU4-41P-201ENST00000364426 143 ntBASIC1.37□□□□□ -2.19
SPENQ96T58 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
SPENQ96T58 RPL23AP29-201ENST00000397284 453 ntBASIC1.37□□□□□ -2.19
SPENQ96T58 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.37□□□□□ -2.19
SPENQ96T58 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC1.37□□□□□ -2.19
SPENQ96T58 AC067852.7-201ENST00000623270 535 ntBASIC1.37□□□□□ -2.19
SPENQ96T58 AC019155.1-201ENST00000382242 574 ntBASIC1.37□□□□□ -2.19
SPENQ96T58 USP9YP27-201ENST00000418455 438 ntBASIC1.37□□□□□ -2.19
SPENQ96T58 HMGN2P18-201ENST00000450680 270 ntBASIC1.37□□□□□ -2.19
SPENQ96T58 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.37□□□□□ -2.19
SPENQ96T58 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.37□□□□□ -2.19
SPENQ96T58 MIR4419B-201ENST00000577260 68 ntBASIC1.37□□□□□ -2.19
SPENQ96T58 AC006026.1-201ENST00000444025 1803 ntBASIC1.36□□□□□ -2.19
SPENQ96T58 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.36□□□□□ -2.19
SPENQ96T58 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.36□□□□□ -2.19
SPENQ96T58 ATG10-AS1-201ENST00000504846 648 ntBASIC1.36□□□□□ -2.19
SPENQ96T58 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.36□□□□□ -2.19
SPENQ96T58 MIR3660-201ENST00000584845 100 ntBASIC1.36□□□□□ -2.19
SPENQ96T58 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
SPENQ96T58 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SPENQ96T58 DDX43P2-201ENST00000604753 1354 ntBASIC1.36□□□□□ -2.19
SPENQ96T58 MTCYBP12-201ENST00000440559 1134 ntBASIC1.36□□□□□ -2.19
SPENQ96T58 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
SPENQ96T58 AC004223.1-201ENST00000479840 271 ntBASIC1.36□□□□□ -2.19
SPENQ96T58 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.36□□□□□ -2.19
SPENQ96T58 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.36□□□□□ -2.19
SPENQ96T58 AC025016.1-201ENST00000616746 682 ntBASIC1.36□□□□□ -2.19
SPENQ96T58 SNRPEP2-201ENST00000397592 279 ntBASIC1.36□□□□□ -2.19
SPENQ96T58 SEC63P1-201ENST00000425785 1258 ntBASIC1.36□□□□□ -2.19
SPENQ96T58 RNA5SP337-201ENST00000517007 109 ntBASIC1.36□□□□□ -2.19
SPENQ96T58 MTCYBP19-201ENST00000517463 1124 ntBASIC1.36□□□□□ -2.19
SPENQ96T58 AC019176.1-201ENST00000518519 225 ntBASIC1.36□□□□□ -2.19
SPENQ96T58 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.36□□□□□ -2.19
SPENQ96T58 MIR502-201ENST00000606349 86 ntBASIC1.36□□□□□ -2.19
SPENQ96T58 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC1.36□□□□□ -2.19
SPENQ96T58 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
SPENQ96T58 RNU6-984P-201ENST00000363236 109 ntBASIC1.35□□□□□ -2.19
SPENQ96T58 AC073310.1-201ENST00000423226 1033 ntBASIC1.35□□□□□ -2.19
SPENQ96T58 AL022400.1-201ENST00000423946 935 ntBASIC1.35□□□□□ -2.19
SPENQ96T58 TPT1P14-201ENST00000448018 505 ntBASIC1.35□□□□□ -2.19
SPENQ96T58 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.35□□□□□ -2.19
SPENQ96T58 RMST_6.1-201ENST00000611980 203 ntBASIC1.35□□□□□ -2.19
SPENQ96T58 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.35□□□□□ -2.19
SPENQ96T58 DYNLL1P5-201ENST00000467158 270 ntBASIC1.35□□□□□ -2.19
SPENQ96T58 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.35□□□□□ -2.19
SPENQ96T58 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
SPENQ96T58 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.35□□□□□ -2.19
SPENQ96T58 SNORA31.11-201ENST00000516528 139 ntBASIC1.35□□□□□ -2.19
SPENQ96T58 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.35□□□□□ -2.19
SPENQ96T58 AL353770.2-201ENST00000620024 78 ntBASIC1.35□□□□□ -2.19
SPENQ96T58 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms