Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
CITED4Q96RK1 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CITED4Q96RK1 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CITED4Q96RK1 RNU6-596P-201ENST00000365395 98 ntBASIC4.93□□□□□ -1.62
CITED4Q96RK1 TINAG-203ENST00000370869 782 ntTSL 3 BASIC4.93□□□□□ -1.62
CITED4Q96RK1 U3.52-201ENST00000384034 216 ntBASIC4.93□□□□□ -1.62
CITED4Q96RK1 RNU6-823P-201ENST00000391042 103 ntBASIC4.93□□□□□ -1.62
CITED4Q96RK1 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CITED4Q96RK1 RPL11P3-201ENST00000395256 523 ntBASIC4.93□□□□□ -1.62
CITED4Q96RK1 AL133270.1-201ENST00000402635 279 ntBASIC4.93□□□□□ -1.62
CITED4Q96RK1 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CITED4Q96RK1 Y_RNA.623-201ENST00000411128 95 ntBASIC4.93□□□□□ -1.62
CITED4Q96RK1 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
CITED4Q96RK1 AL731563.1-201ENST00000442202 214 ntBASIC4.93□□□□□ -1.62
CITED4Q96RK1 POU5F1P5-201ENST00000445059 658 ntBASIC4.93□□□□□ -1.62
CITED4Q96RK1 HMGN1P2-201ENST00000445197 310 ntBASIC4.93□□□□□ -1.62
CITED4Q96RK1 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.93□□□□□ -1.62
CITED4Q96RK1 U8.20-201ENST00000459445 131 ntBASIC4.93□□□□□ -1.62
CITED4Q96RK1 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CITED4Q96RK1 RN7SL717P-201ENST00000478343 297 ntBASIC4.93□□□□□ -1.62
CITED4Q96RK1 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.93□□□□□ -1.62
CITED4Q96RK1 RNA5SP165-201ENST00000517142 115 ntBASIC4.93□□□□□ -1.62
CITED4Q96RK1 IGHV7-34-1-201ENST00000519200 350 ntBASIC4.93□□□□□ -1.62
CITED4Q96RK1 FKBP1BP1-201ENST00000553366 325 ntBASIC4.93□□□□□ -1.62
CITED4Q96RK1 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.93□□□□□ -1.62
CITED4Q96RK1 AC026956.1-201ENST00000558741 396 ntBASIC4.93□□□□□ -1.62
CITED4Q96RK1 AC051619.2-201ENST00000559063 397 ntBASIC4.93□□□□□ -1.62
CITED4Q96RK1 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC4.93□□□□□ -1.62
CITED4Q96RK1 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.93□□□□□ -1.62
CITED4Q96RK1 OR1E3-201ENST00000575608 948 ntBASIC4.93□□□□□ -1.62
CITED4Q96RK1 VN1R107P-201ENST00000601784 209 ntBASIC4.93□□□□□ -1.62
CITED4Q96RK1 AC010632.3-201ENST00000611377 369 ntBASIC4.93□□□□□ -1.62
CITED4Q96RK1 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC4.93□□□□□ -1.62
CITED4Q96RK1 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.93□□□□□ -1.62
CITED4Q96RK1 AC025031.4-201ENST00000621248 3271 ntBASIC4.93□□□□□ -1.62
CITED4Q96RK1 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
CITED4Q96RK1 AL731566.1-201ENST00000620490 1937 ntBASIC4.93□□□□□ -1.62
CITED4Q96RK1 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.93□□□□□ -1.62
CITED4Q96RK1 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CITED4Q96RK1 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.93□□□□□ -1.62
CITED4Q96RK1 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CITED4Q96RK1 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CITED4Q96RK1 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
CITED4Q96RK1 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CITED4Q96RK1 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
CITED4Q96RK1 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CITED4Q96RK1 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.92□□□□□ -1.62
CITED4Q96RK1 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.92□□□□□ -1.62
CITED4Q96RK1 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CITED4Q96RK1 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CITED4Q96RK1 RNU6-741P-201ENST00000383889 107 ntBASIC4.92□□□□□ -1.62
CITED4Q96RK1 Y_RNA.577-201ENST00000384794 101 ntBASIC4.92□□□□□ -1.62
CITED4Q96RK1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CITED4Q96RK1 SNORA11B-201ENST00000408175 129 ntBASIC4.92□□□□□ -1.62
CITED4Q96RK1 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CITED4Q96RK1 NUP35P1-201ENST00000422734 947 ntBASIC4.92□□□□□ -1.62
CITED4Q96RK1 AC108059.2-201ENST00000434626 151 ntBASIC4.92□□□□□ -1.62
CITED4Q96RK1 HMGB1P12-201ENST00000438594 598 ntBASIC4.92□□□□□ -1.62
CITED4Q96RK1 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.92□□□□□ -1.62
CITED4Q96RK1 OR1H1P-201ENST00000448731 937 ntBASIC4.92□□□□□ -1.62
CITED4Q96RK1 OR2AQ1P-201ENST00000451972 200 ntBASIC4.92□□□□□ -1.62
CITED4Q96RK1 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC4.92□□□□□ -1.62
CITED4Q96RK1 RNU7-169P-201ENST00000459456 61 ntBASIC4.92□□□□□ -1.62
CITED4Q96RK1 U8.21-201ENST00000459536 136 ntBASIC4.92□□□□□ -1.62
CITED4Q96RK1 FTH1P2-201ENST00000466086 412 ntBASIC4.92□□□□□ -1.62
CITED4Q96RK1 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.92□□□□□ -1.62
CITED4Q96RK1 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.92□□□□□ -1.62
CITED4Q96RK1 MRPS35P2-201ENST00000508242 191 ntBASIC4.92□□□□□ -1.62
CITED4Q96RK1 AC007016.1-201ENST00000512110 244 ntBASIC4.92□□□□□ -1.62
CITED4Q96RK1 SNORA74.1-201ENST00000516320 180 ntBASIC4.92□□□□□ -1.62
CITED4Q96RK1 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.92□□□□□ -1.62
CITED4Q96RK1 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC4.92□□□□□ -1.62
CITED4Q96RK1 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CITED4Q96RK1 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.92□□□□□ -1.62
CITED4Q96RK1 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC4.92□□□□□ -1.62
CITED4Q96RK1 AC027229.1-201ENST00000583887 253 ntBASIC4.92□□□□□ -1.62
CITED4Q96RK1 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.92□□□□□ -1.62
CITED4Q96RK1 AC005255.1-201ENST00000593748 216 ntBASIC4.92□□□□□ -1.62
CITED4Q96RK1 AC008121.1-201ENST00000603244 268 ntBASIC4.92□□□□□ -1.62
CITED4Q96RK1 IGKV2OR2-10-201ENST00000613976 311 ntBASIC4.92□□□□□ -1.62
CITED4Q96RK1 AC004852.3-201ENST00000614131 326 ntBASIC4.92□□□□□ -1.62
CITED4Q96RK1 uc_338.31-201ENST00000615595 186 ntBASIC4.92□□□□□ -1.62
CITED4Q96RK1 AC090132.2-201ENST00000615881 347 ntBASIC4.92□□□□□ -1.62
CITED4Q96RK1 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.92□□□□□ -1.62
CITED4Q96RK1 SNX18P12-201ENST00000624821 759 ntBASIC4.92□□□□□ -1.62
CITED4Q96RK1 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.92□□□□□ -1.62
CITED4Q96RK1 AC073488.9-201ENST00000631601 754 ntBASIC4.92□□□□□ -1.62
CITED4Q96RK1 AC073488.6-201ENST00000632293 754 ntBASIC4.92□□□□□ -1.62
CITED4Q96RK1 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CITED4Q96RK1 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CITED4Q96RK1 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
CITED4Q96RK1 AC066616.2-201ENST00000559334 1481 ntBASIC4.92□□□□□ -1.62
CITED4Q96RK1 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
CITED4Q96RK1 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.92□□□□□ -1.62
CITED4Q96RK1 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CITED4Q96RK1 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CITED4Q96RK1 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CITED4Q96RK1 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CITED4Q96RK1 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CITED4Q96RK1 AC126323.6-202ENST00000568092 3511 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms