Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 TRBV26-201ENST00000456572 344 ntBASIC3.2□□□□□ -1.9
DUX3Q96PT4 RPS29P25-201ENST00000481709 171 ntBASIC3.2□□□□□ -1.9
DUX3Q96PT4 RPS3AP50-201ENST00000487064 803 ntBASIC3.2□□□□□ -1.9
DUX3Q96PT4 UBE2CP3-201ENST00000502715 450 ntBASIC3.2□□□□□ -1.9
DUX3Q96PT4 RNF138P1-201ENST00000502765 546 ntBASIC3.2□□□□□ -1.9
DUX3Q96PT4 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.2□□□□□ -1.9
DUX3Q96PT4 AC010587.1-201ENST00000505809 469 ntBASIC3.2□□□□□ -1.9
DUX3Q96PT4 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.2□□□□□ -1.9
DUX3Q96PT4 Y_RNA.693-201ENST00000516641 110 ntBASIC3.2□□□□□ -1.9
DUX3Q96PT4 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.2□□□□□ -1.9
DUX3Q96PT4 AC023632.4-201ENST00000517783 191 ntBASIC3.2□□□□□ -1.9
DUX3Q96PT4 AP001646.1-201ENST00000527936 915 ntBASIC3.2□□□□□ -1.9
DUX3Q96PT4 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
DUX3Q96PT4 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.2□□□□□ -1.9
DUX3Q96PT4 HIF1AP1-201ENST00000553642 175 ntBASIC3.2□□□□□ -1.9
DUX3Q96PT4 SUB1P2-201ENST00000556401 297 ntBASIC3.2□□□□□ -1.9
DUX3Q96PT4 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.2□□□□□ -1.9
DUX3Q96PT4 AL845331.3-202ENST00000562856 261 ntBASIC3.2□□□□□ -1.9
DUX3Q96PT4 AC034105.3-201ENST00000565294 442 ntBASIC3.2□□□□□ -1.9
DUX3Q96PT4 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.2□□□□□ -1.9
DUX3Q96PT4 AC090616.5-202ENST00000582111 297 ntBASIC3.2□□□□□ -1.9
DUX3Q96PT4 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.2□□□□□ -1.9
DUX3Q96PT4 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.2□□□□□ -1.9
DUX3Q96PT4 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.2□□□□□ -1.9
DUX3Q96PT4 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.2□□□□□ -1.9
DUX3Q96PT4 C8orf59P2-201ENST00000603441 271 ntBASIC3.2□□□□□ -1.9
DUX3Q96PT4 Z84480.1-201ENST00000605131 311 ntBASIC3.2□□□□□ -1.9
DUX3Q96PT4 AL158211.4-201ENST00000606988 584 ntBASIC3.2□□□□□ -1.9
DUX3Q96PT4 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
DUX3Q96PT4 AC006065.5-201ENST00000623427 349 ntBASIC3.2□□□□□ -1.9
DUX3Q96PT4 MIR3662-201ENST00000637030 95 ntBASIC3.2□□□□□ -1.9
DUX3Q96PT4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
DUX3Q96PT4 AC027287.1-201ENST00000553115 1453 ntBASIC3.2□□□□□ -1.9
DUX3Q96PT4 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.2□□□□□ -1.9
DUX3Q96PT4 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
DUX3Q96PT4 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
DUX3Q96PT4 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DUX3Q96PT4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
DUX3Q96PT4 RNA5SP388-201ENST00000362584 119 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 RNU6-1085P-201ENST00000363576 107 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 Y_RNA.160-201ENST00000363677 92 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 SNORD74.4-201ENST00000364129 80 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 RN7SKP280-201ENST00000364196 304 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 Y_RNA.813-201ENST00000364639 102 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
DUX3Q96PT4 RNU6-1103P-201ENST00000384150 107 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 RNU6-1207P-201ENST00000384343 107 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 MIR513A2-201ENST00000385249 127 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
DUX3Q96PT4 FGF7P8-201ENST00000402994 292 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 AL024474.1-201ENST00000404655 591 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 RNU2-9P-201ENST00000410194 145 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 RNA5SP39-201ENST00000411245 120 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.19□□□□□ -1.9
DUX3Q96PT4 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.19□□□□□ -1.9
DUX3Q96PT4 AC004987.3-201ENST00000413879 771 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.19□□□□□ -1.9
DUX3Q96PT4 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.19□□□□□ -1.9
DUX3Q96PT4 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.19□□□□□ -1.9
DUX3Q96PT4 RPL7P54-201ENST00000438336 674 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
DUX3Q96PT4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.19□□□□□ -1.9
DUX3Q96PT4 AC112653.1-201ENST00000443851 386 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 RPL21P89-201ENST00000444021 467 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 UBE2V1P7-201ENST00000446395 340 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.19□□□□□ -1.9
DUX3Q96PT4 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.19□□□□□ -1.9
DUX3Q96PT4 AP001992.1-205ENST00000462248 379 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.19□□□□□ -1.9
DUX3Q96PT4 HMGN1P12-201ENST00000499125 195 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 AC108145.1-201ENST00000503770 153 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 AC018710.1-201ENST00000506509 158 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.19□□□□□ -1.9
DUX3Q96PT4 PPBPP1-201ENST00000510807 373 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 AC025465.4-201ENST00000513422 638 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 IGKV2D-36-201ENST00000518643 226 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 IGKV2-23-201ENST00000518729 323 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 IGLV3-26-201ENST00000520756 302 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 PHBP17-201ENST00000528576 541 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 OR4P1P-201ENST00000530808 1136 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.19□□□□□ -1.9
DUX3Q96PT4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.19□□□□□ -1.9
DUX3Q96PT4 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.19□□□□□ -1.9
DUX3Q96PT4 AC107016.1-201ENST00000550463 337 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DUX3Q96PT4 ZNF192P1-203ENST00000565888 810 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.19□□□□□ -1.9
DUX3Q96PT4 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.19□□□□□ -1.9
DUX3Q96PT4 AC008752.3-201ENST00000588113 712 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 AP001429.1-201ENST00000602568 530 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 AC245014.2-201ENST00000603689 287 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 AC025449.1-201ENST00000603896 529 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 AC112230.1-201ENST00000604342 547 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 AC246785.4-201ENST00000605374 287 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DUX3Q96PT4 AC063943.3-201ENST00000615562 356 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 AC009318.4-201ENST00000620496 486 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 AL356585.4-201ENST00000623078 1229 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 AC019278.1-201ENST00000623516 479 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms