Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 HMGB1P25-201ENST00000468402 607 ntBASIC2.96□□□□□ -1.94
LINC00479Q96M42 RN7SL738P-201ENST00000470264 297 ntBASIC2.96□□□□□ -1.94
LINC00479Q96M42 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.96□□□□□ -1.94
LINC00479Q96M42 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.96□□□□□ -1.94
LINC00479Q96M42 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.96□□□□□ -1.94
LINC00479Q96M42 RNU6-507P-201ENST00000516045 100 ntBASIC2.96□□□□□ -1.94
LINC00479Q96M42 Y_RNA.693-201ENST00000516641 110 ntBASIC2.96□□□□□ -1.94
LINC00479Q96M42 RN7SKP82-201ENST00000516786 223 ntBASIC2.96□□□□□ -1.94
LINC00479Q96M42 RNA5SP337-201ENST00000517007 109 ntBASIC2.96□□□□□ -1.94
LINC00479Q96M42 RN7SKP234-201ENST00000517173 224 ntBASIC2.96□□□□□ -1.94
LINC00479Q96M42 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.96□□□□□ -1.94
LINC00479Q96M42 MTND1P35-201ENST00000526739 508 ntBASIC2.96□□□□□ -1.94
LINC00479Q96M42 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.96□□□□□ -1.94
LINC00479Q96M42 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LINC00479Q96M42 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.96□□□□□ -1.94
LINC00479Q96M42 AL121579.1-201ENST00000555129 305 ntBASIC2.96□□□□□ -1.94
LINC00479Q96M42 SUB1P2-201ENST00000556401 297 ntBASIC2.96□□□□□ -1.94
LINC00479Q96M42 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC2.96□□□□□ -1.94
LINC00479Q96M42 AC006504.3-201ENST00000586818 523 ntBASIC2.96□□□□□ -1.94
LINC00479Q96M42 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.96□□□□□ -1.94
LINC00479Q96M42 AC025449.1-201ENST00000603896 529 ntBASIC2.96□□□□□ -1.94
LINC00479Q96M42 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.96□□□□□ -1.94
LINC00479Q96M42 AC093788.1-201ENST00000609356 927 ntBASIC2.96□□□□□ -1.94
LINC00479Q96M42 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.96□□□□□ -1.94
LINC00479Q96M42 U6.42-201ENST00000618440 107 ntBASIC2.96□□□□□ -1.94
LINC00479Q96M42 AC006338.1-201ENST00000618453 749 ntBASIC2.96□□□□□ -1.94
LINC00479Q96M42 MIR7703-201ENST00000620784 77 ntBASIC2.96□□□□□ -1.94
LINC00479Q96M42 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.96□□□□□ -1.94
LINC00479Q96M42 ZNF734P-201ENST00000419494 1534 ntBASIC2.96□□□□□ -1.94
LINC00479Q96M42 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
LINC00479Q96M42 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
LINC00479Q96M42 AC011460.1-201ENST00000636268 1834 ntBASIC2.96□□□□□ -1.94
LINC00479Q96M42 AL592437.2-201ENST00000421655 2434 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
LINC00479Q96M42 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC2.95□□□□□ -1.94
LINC00479Q96M42 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC2.95□□□□□ -1.94
LINC00479Q96M42 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
LINC00479Q96M42 SAGE2P-201ENST00000420011 2126 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.95□□□□□ -1.94
LINC00479Q96M42 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
LINC00479Q96M42 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
LINC00479Q96M42 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
LINC00479Q96M42 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.95□□□□□ -1.94
LINC00479Q96M42 RNA5-8SP7-201ENST00000363443 155 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 RNA5SP505-201ENST00000364748 108 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 RNU6-534P-201ENST00000364877 106 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
LINC00479Q96M42 SNORA20.2-201ENST00000383922 131 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 RNU6-761P-201ENST00000384148 107 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 MIR19A-201ENST00000384878 82 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 MT-TC-201ENST00000387405 66 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
LINC00479Q96M42 RNU6-328P-201ENST00000390887 106 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 U3.20-201ENST00000390909 217 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 RNU4-78P-201ENST00000410940 126 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
LINC00479Q96M42 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.95□□□□□ -1.94
LINC00479Q96M42 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.95□□□□□ -1.94
LINC00479Q96M42 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
LINC00479Q96M42 TIMM9P1-201ENST00000436122 256 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 AL138799.3-201ENST00000438968 350 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.95□□□□□ -1.94
LINC00479Q96M42 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.95□□□□□ -1.94
LINC00479Q96M42 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.95□□□□□ -1.94
LINC00479Q96M42 RPS11P1-201ENST00000451072 473 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 RPL23AP24-201ENST00000458203 385 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 RNU6-420P-201ENST00000458780 107 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 SNORD121B-201ENST00000458838 81 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 RPL31P58-201ENST00000469001 379 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 AC023194.1-201ENST00000493084 308 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC2.95□□□□□ -1.94
LINC00479Q96M42 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.95□□□□□ -1.94
LINC00479Q96M42 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.95□□□□□ -1.94
LINC00479Q96M42 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC2.95□□□□□ -1.94
LINC00479Q96M42 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.95□□□□□ -1.94
LINC00479Q96M42 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.95□□□□□ -1.94
LINC00479Q96M42 AC090572.1-201ENST00000519251 160 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 SUMO2P20-201ENST00000520803 283 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC2.95□□□□□ -1.94
LINC00479Q96M42 AC022790.1-201ENST00000522872 204 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 OR4T1P-201ENST00000554933 911 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 AL161713.1-201ENST00000555538 145 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 AC025678.1-201ENST00000567861 338 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 MIR5047-201ENST00000579212 100 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC2.95□□□□□ -1.94
LINC00479Q96M42 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC2.95□□□□□ -1.94
LINC00479Q96M42 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.95□□□□□ -1.94
LINC00479Q96M42 AC010680.3-201ENST00000604215 520 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 Z84480.1-201ENST00000605131 311 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 AC008277.2-201ENST00000605196 797 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 AP003117.2-201ENST00000606010 545 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 AC103710.3-201ENST00000608157 948 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 MIR6868-201ENST00000611215 58 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 AC092794.2-201ENST00000620933 563 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 DUXAP9-208ENST00000622815 614 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 MIR1321-201ENST00000637766 79 ntBASIC2.95□□□□□ -1.94
LINC00479Q96M42 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.95□□□□□ -1.94
LINC00479Q96M42 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
LINC00479Q96M42 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
LINC00479Q96M42 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms