Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 MIR320B2-201ENST00000408479 138 ntBASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 RN7SKP117-201ENST00000410175 264 ntBASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 Z85995.1-201ENST00000415547 335 ntBASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 AC078809.1-201ENST00000427601 140 ntBASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 MTATP6P21-201ENST00000440681 189 ntBASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 RN7SL456P-201ENST00000469290 295 ntBASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 MYL6P4-201ENST00000477911 453 ntBASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 COX6CP6-201ENST00000490840 228 ntBASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 AC146944.3-201ENST00000509969 371 ntBASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 RNU6-857P-201ENST00000515893 110 ntBASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 NDUFA3P2-201ENST00000531434 232 ntBASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 PYM1-205ENST00000547925 499 ntTSL 3 BASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 FAM30C-201ENST00000561158 410 ntBASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 EEF1B2P1-201ENST00000567221 672 ntBASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 AC103564.3-201ENST00000621194 220 ntBASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 AL356585.10-201ENST00000641883 123 ntBASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 AL133383.2-201ENST00000622958 2336 ntBASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MS4A3Q96HJ5 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 ZNF402P-201ENST00000404435 3100 ntBASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 MIR302B-201ENST00000362188 73 ntBASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 Y_RNA.93-201ENST00000363066 109 ntBASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 RNY1P1-201ENST00000364372 112 ntBASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 RNU6-484P-201ENST00000384016 107 ntBASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 RNA5SP231-201ENST00000410496 138 ntBASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 FTLP17-201ENST00000432567 525 ntBASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 AL772161.1-201ENST00000439130 476 ntBASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 RN7SL160P-201ENST00000468558 284 ntBASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 RPS10P28-201ENST00000480396 498 ntBASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 RN7SL657P-201ENST00000582431 293 ntBASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 AL031777.2-201ENST00000611953 196 ntBASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 MIR548AY-201ENST00000617669 107 ntBASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 SNX18P3-202ENST00000565670 1750 ntBASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
MS4A3Q96HJ5 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 AL161901.1-201ENST00000624954 3425 ntBASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 Y_RNA.587-201ENST00000391210 103 ntBASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 SNORA36B-201ENST00000410438 131 ntBASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 AL138479.1-201ENST00000426913 484 ntBASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 AC099670.2-201ENST00000435130 321 ntBASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 HMGB1P37-201ENST00000439613 609 ntBASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 AC007969.2-201ENST00000441891 191 ntBASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms