Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC017083.1-201ENST00000428093 483 ntBASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 RPL21P112-201ENST00000434403 463 ntBASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 MTCO3P20-201ENST00000454926 688 ntBASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 RNU7-59P-201ENST00000459101 61 ntBASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 AC078817.1-201ENST00000492623 435 ntBASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 RN7SL323P-201ENST00000494712 295 ntBASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 AC078918.1-201ENST00000498515 228 ntBASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 RNU6-720P-201ENST00000516363 108 ntBASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 RNU6-430P-201ENST00000517078 107 ntBASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 AP000857.1-201ENST00000532151 543 ntBASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 KC877982.1-201ENST00000602313 470 ntBASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 AC091304.9-201ENST00000612091 226 ntBASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 MIR6130-201ENST00000619419 109 ntBASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 AC091953.2-201ENST00000623979 160 ntBASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 AC138649.5-201ENST00000637456 137 ntBASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 AL138713.1-201ENST00000624026 2130 ntBASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CHMP4CQ96CF2 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 AC024560.2-201ENST00000507981 1497 ntBASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 RNA5SP124-201ENST00000362739 110 ntBASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 SNORA7.2-201ENST00000364446 145 ntBASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 RNY4P16-201ENST00000364768 94 ntBASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 Y_RNA.505-201ENST00000384489 102 ntBASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 MIR23B-201ENST00000384832 97 ntBASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 Y_RNA.582-201ENST00000391023 95 ntBASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 RNU6-882P-201ENST00000391025 103 ntBASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 AL590704.1-201ENST00000402856 794 ntBASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 RPS15AP12-201ENST00000419498 388 ntBASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 AC009961.2-201ENST00000435771 251 ntBASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 AC092473.1-201ENST00000441098 221 ntBASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 USP9YP15-201ENST00000442391 422 ntBASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 NPM1P49-201ENST00000448027 714 ntBASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 MTCYBP1-201ENST00000454315 1119 ntBASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 AC011825.1-201ENST00000484967 388 ntBASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 AL358832.1-201ENST00000497800 389 ntBASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 AC096751.1-202ENST00000502691 1067 ntBASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 MLLT10P2-201ENST00000506434 249 ntBASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 AC010342.1-201ENST00000514047 877 ntBASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 RNA5SP164-201ENST00000516533 110 ntBASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 AC009063.1-201ENST00000563342 702 ntBASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 AC005951.1-201ENST00000576706 485 ntBASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 MIR3118-1-201ENST00000581787 76 ntBASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 AL391813.2-201ENST00000609113 322 ntBASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 AC015967.1-201ENST00000619893 476 ntBASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 AL354798.1-201ENST00000622505 329 ntBASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.63□□□□□ -1.67
CHMP4CQ96CF2 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 RPL23AP32-201ENST00000395315 459 ntBASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 RNU4-65P-201ENST00000410473 140 ntBASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 RNU6-195P-201ENST00000411352 109 ntBASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 AC127391.1-201ENST00000411737 98 ntBASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 TOMM22P1-201ENST00000418578 312 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms