Protein–RNA interactions for Protein: Q96A33

CCDC47, Coiled-coil domain-containing protein 47, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47Q96A33 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC47Q96A33 MTCO1P9-201ENST00000505577 1534 ntBASIC3.34□□□□□ -1.87
CCDC47Q96A33 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC47Q96A33 SNORA38.1-201ENST00000364172 131 ntBASIC3.34□□□□□ -1.87
CCDC47Q96A33 MIR670-201ENST00000390142 98 ntBASIC3.34□□□□□ -1.87
CCDC47Q96A33 RNU6-1000P-201ENST00000391066 106 ntBASIC3.34□□□□□ -1.87
CCDC47Q96A33 AL590084.1-201ENST00000407885 387 ntBASIC3.34□□□□□ -1.87
CCDC47Q96A33 RAP1BP1-201ENST00000412709 553 ntBASIC3.34□□□□□ -1.87
CCDC47Q96A33 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC47Q96A33 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC47Q96A33 AC090774.1-201ENST00000435925 246 ntBASIC3.34□□□□□ -1.87
CCDC47Q96A33 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC47Q96A33 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC47Q96A33 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC47Q96A33 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC47Q96A33 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.34□□□□□ -1.87
CCDC47Q96A33 FTH1P2-201ENST00000466086 412 ntBASIC3.34□□□□□ -1.87
CCDC47Q96A33 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC47Q96A33 HSPE1P6-201ENST00000479457 291 ntBASIC3.34□□□□□ -1.87
CCDC47Q96A33 RNU6-276P-201ENST00000516114 96 ntBASIC3.34□□□□□ -1.87
CCDC47Q96A33 RNU6-528P-201ENST00000516926 100 ntBASIC3.34□□□□□ -1.87
CCDC47Q96A33 SNORA31.22-201ENST00000517204 135 ntBASIC3.34□□□□□ -1.87
CCDC47Q96A33 MTCO1P47-201ENST00000523889 1271 ntBASIC3.34□□□□□ -1.87
CCDC47Q96A33 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC47Q96A33 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC47Q96A33 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC47Q96A33 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC47Q96A33 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC47Q96A33 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC47Q96A33 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC47Q96A33 AC011451.2-201ENST00000604303 598 ntBASIC3.34□□□□□ -1.87
CCDC47Q96A33 RPL23AP88-201ENST00000605759 454 ntBASIC3.34□□□□□ -1.87
CCDC47Q96A33 AC004067.1-201ENST00000608733 700 ntBASIC3.34□□□□□ -1.87
CCDC47Q96A33 AC104763.3-201ENST00000613765 618 ntBASIC3.34□□□□□ -1.87
CCDC47Q96A33 MIR7112-201ENST00000616126 65 ntBASIC3.34□□□□□ -1.87
CCDC47Q96A33 MIR6075-201ENST00000620782 95 ntBASIC3.34□□□□□ -1.87
CCDC47Q96A33 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC47Q96A33 LRRC77P-213ENST00000637727 880 ntBASIC3.34□□□□□ -1.87
CCDC47Q96A33 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC47Q96A33 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC47Q96A33 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC47Q96A33 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC47Q96A33 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC47Q96A33 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.33□□□□□ -1.88
CCDC47Q96A33 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC47Q96A33 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC47Q96A33 SNORA71.1-201ENST00000364523 117 ntBASIC3.33□□□□□ -1.88
CCDC47Q96A33 RNU6-1180P-201ENST00000364935 107 ntBASIC3.33□□□□□ -1.88
CCDC47Q96A33 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC47Q96A33 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC47Q96A33 RPL19P1-201ENST00000411635 428 ntBASIC3.33□□□□□ -1.88
CCDC47Q96A33 TPMTP2-201ENST00000414372 726 ntBASIC3.33□□□□□ -1.88
CCDC47Q96A33 AL672167.3-201ENST00000465951 960 ntBASIC3.33□□□□□ -1.88
CCDC47Q96A33 RPL27AP5-201ENST00000469428 449 ntBASIC3.33□□□□□ -1.88
CCDC47Q96A33 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC47Q96A33 AL049874.1-201ENST00000489560 388 ntBASIC3.33□□□□□ -1.88
CCDC47Q96A33 SEM1P1-201ENST00000506694 209 ntBASIC3.33□□□□□ -1.88
CCDC47Q96A33 AC074250.1-201ENST00000511117 192 ntBASIC3.33□□□□□ -1.88
CCDC47Q96A33 AC006499.2-201ENST00000513470 337 ntBASIC3.33□□□□□ -1.88
CCDC47Q96A33 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC47Q96A33 AC026801.2-201ENST00000515352 425 ntBASIC3.33□□□□□ -1.88
CCDC47Q96A33 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.33□□□□□ -1.88
CCDC47Q96A33 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC47Q96A33 AC005832.3-201ENST00000537929 631 ntBASIC3.33□□□□□ -1.88
CCDC47Q96A33 ACTR3BP3-201ENST00000565577 979 ntBASIC3.33□□□□□ -1.88
CCDC47Q96A33 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.33□□□□□ -1.88
CCDC47Q96A33 MIR5004-201ENST00000579078 107 ntBASIC3.33□□□□□ -1.88
CCDC47Q96A33 BNIP3P31-201ENST00000604515 566 ntBASIC3.33□□□□□ -1.88
CCDC47Q96A33 AC090132.2-201ENST00000615881 347 ntBASIC3.33□□□□□ -1.88
CCDC47Q96A33 MIR6130-201ENST00000619419 109 ntBASIC3.33□□□□□ -1.88
CCDC47Q96A33 AL022578.1-201ENST00000439330 1433 ntBASIC3.33□□□□□ -1.88
CCDC47Q96A33 FAM35BP-202ENST00000497389 3337 ntBASIC3.33□□□□□ -1.88
CCDC47Q96A33 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC47Q96A33 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC47Q96A33 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC47Q96A33 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC47Q96A33 AC073325.2-201ENST00000339545 159 ntBASIC3.32□□□□□ -1.88
CCDC47Q96A33 RNU1-109P-201ENST00000383960 147 ntBASIC3.32□□□□□ -1.88
CCDC47Q96A33 RNU6-198P-201ENST00000384258 104 ntBASIC3.32□□□□□ -1.88
CCDC47Q96A33 Y_RNA.548-201ENST00000384656 105 ntBASIC3.32□□□□□ -1.88
CCDC47Q96A33 MIR34B-201ENST00000385076 84 ntBASIC3.32□□□□□ -1.88
CCDC47Q96A33 RNU2-25P-201ENST00000411041 191 ntBASIC3.32□□□□□ -1.88
CCDC47Q96A33 BX682237.1-201ENST00000415016 335 ntBASIC3.32□□□□□ -1.88
CCDC47Q96A33 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC47Q96A33 AC009237.8-201ENST00000445492 379 ntBASIC3.32□□□□□ -1.88
CCDC47Q96A33 OR6K1P-201ENST00000456766 971 ntBASIC3.32□□□□□ -1.88
CCDC47Q96A33 RNU7-136P-201ENST00000458819 69 ntBASIC3.32□□□□□ -1.88
CCDC47Q96A33 snoU13.8-201ENST00000458890 104 ntBASIC3.32□□□□□ -1.88
CCDC47Q96A33 snoU13.28-201ENST00000459235 104 ntBASIC3.32□□□□□ -1.88
CCDC47Q96A33 OR2A20P-203ENST00000498397 1268 ntBASIC3.32□□□□□ -1.88
CCDC47Q96A33 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC47Q96A33 RNY4P37-201ENST00000516225 96 ntBASIC3.32□□□□□ -1.88
CCDC47Q96A33 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC47Q96A33 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.32□□□□□ -1.88
CCDC47Q96A33 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC47Q96A33 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC47Q96A33 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC47Q96A33 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC47Q96A33 AL137843.1-201ENST00000605078 385 ntBASIC3.32□□□□□ -1.88
CCDC47Q96A33 Z99129.2-201ENST00000619967 314 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms