Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 RAB9BP1-201ENST00000519581 626 ntBASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 AP001646.1-201ENST00000527936 915 ntBASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 CYCSP29-201ENST00000533731 318 ntBASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 PDCD5P1-201ENST00000543528 309 ntBASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 AC107016.1-201ENST00000550463 337 ntBASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 AC090616.5-202ENST00000582111 297 ntBASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 AC025449.1-201ENST00000603896 529 ntBASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 LARP7P1-201ENST00000605576 316 ntBASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 AC007038.2-201ENST00000608095 740 ntBASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 AC004908.2-201ENST00000609090 574 ntBASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 AC245517.5-201ENST00000611529 162 ntBASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 FER-210ENST00000628534 558 ntTSL 5 BASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 AC006504.1-201ENST00000562493 3666 ntBASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 FAM91A3P-201ENST00000456826 2544 ntBASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 MTCO1P24-201ENST00000515438 1558 ntBASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 FAM35DP-201ENST00000323387 2712 ntBASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 RNY3P13-201ENST00000365542 102 ntBASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 MIR141-201ENST00000384975 95 ntBASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 MT-TL1-201ENST00000386347 75 ntBASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 RNU6-876P-201ENST00000391295 104 ntBASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 RNU2-62P-201ENST00000410868 191 ntBASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 HMGN1P24-201ENST00000412282 298 ntBASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 ZNF90P2-204ENST00000419323 1075 ntBASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 ATP5HP2-201ENST00000433885 485 ntBASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 AL590399.6-201ENST00000446396 307 ntBASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 AC079781.2-201ENST00000446424 169 ntBASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 RPL29P29-201ENST00000448725 423 ntBASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 AC009220.1-201ENST00000451614 275 ntBASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 AC022364.2-201ENST00000457963 554 ntBASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 AC083798.1-201ENST00000472671 131 ntBASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 TMEM248P1-201ENST00000510579 951 ntBASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 RNU6-410P-201ENST00000517006 107 ntBASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 OR4T1P-201ENST00000554933 911 ntBASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 AC005730.3-201ENST00000583067 366 ntBASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 AC091135.1-201ENST00000585943 307 ntBASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 AC020914.4-201ENST00000597690 277 ntBASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 NRBF2P5-201ENST00000603087 788 ntBASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 AL049634.3-201ENST00000604968 457 ntBASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 AC069234.5-201ENST00000611056 416 ntBASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 NCAPGP1-201ENST00000505112 1814 ntBASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.07□□□□□ -1.76
ATG4AQ8WYN0 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 NMD3P1-201ENST00000439704 1488 ntBASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 OR1S2-201ENST00000302592 978 ntBASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 Y_RNA.38-201ENST00000362617 102 ntBASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 RNU6-1078P-201ENST00000364522 103 ntBASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 AC068050.1-201ENST00000394891 380 ntBASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 RNU6-908P-201ENST00000410160 94 ntBASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 MRPL50P2-201ENST00000416821 482 ntBASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 SNRPEP10-201ENST00000420249 274 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms