Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.31□□□□□ -2.04
RTN4IP1Q8WWV3 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RTN4IP1Q8WWV3 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RTN4IP1Q8WWV3 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.31□□□□□ -2.04
RTN4IP1Q8WWV3 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.31□□□□□ -2.04
RTN4IP1Q8WWV3 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.31□□□□□ -2.04
RTN4IP1Q8WWV3 AC245036.5-201ENST00000596330 847 ntBASIC2.31□□□□□ -2.04
RTN4IP1Q8WWV3 AC009220.3-201ENST00000604318 586 ntBASIC2.31□□□□□ -2.04
RTN4IP1Q8WWV3 DPRXP5-201ENST00000604662 539 ntBASIC2.31□□□□□ -2.04
RTN4IP1Q8WWV3 AC106791.2-201ENST00000604680 391 ntBASIC2.31□□□□□ -2.04
RTN4IP1Q8WWV3 AC128687.1-201ENST00000605304 619 ntBASIC2.31□□□□□ -2.04
RTN4IP1Q8WWV3 RNU4-5P-201ENST00000607255 135 ntBASIC2.31□□□□□ -2.04
RTN4IP1Q8WWV3 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.31□□□□□ -2.04
RTN4IP1Q8WWV3 AC005332.6-201ENST00000613178 446 ntBASIC2.31□□□□□ -2.04
RTN4IP1Q8WWV3 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RTN4IP1Q8WWV3 FAM35BP-202ENST00000497389 3337 ntBASIC2.31□□□□□ -2.04
RTN4IP1Q8WWV3 AC006378.2-201ENST00000623178 2476 ntBASIC2.31□□□□□ -2.04
RTN4IP1Q8WWV3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RTN4IP1Q8WWV3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
RTN4IP1Q8WWV3 AC233263.6-201ENST00000631132 1963 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 RNU6-216P-201ENST00000363282 104 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 Y_RNA.333-201ENST00000365274 102 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 MIR491-201ENST00000384877 84 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 AL096701.2-201ENST00000416920 238 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 AL356320.2-201ENST00000417263 507 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 RPS3AP37-201ENST00000419176 745 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 ATG3P1-201ENST00000419507 911 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 RPL23AP74-201ENST00000437246 471 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 USP9YP22-201ENST00000438971 294 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 RPL39P6-201ENST00000448289 150 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 NANOGNBP1-201ENST00000448444 480 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 AL034418.1-201ENST00000448675 860 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 S100A11P2-201ENST00000467589 312 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 RPS15AP17-201ENST00000470598 390 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 RPS29P26-201ENST00000477483 171 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 AC108734.3-201ENST00000481241 1165 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 AC096751.1-202ENST00000502691 1067 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 UBE2V1P12-201ENST00000503954 474 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 HMGB1P28-201ENST00000507778 552 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 MTATP6P9-201ENST00000515039 680 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 AC024224.1-201ENST00000538284 609 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 AC004486.1-201ENST00000546846 233 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 AADACP1-206ENST00000561502 1193 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 AL132657.2-201ENST00000564417 358 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 MIR3670-2-201ENST00000582974 65 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 MIR3670-1-201ENST00000584160 65 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 MIR3670-3-201ENST00000584855 65 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 AC024153.1-201ENST00000603103 365 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 AC011458.1-201ENST00000604034 617 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 AP000787.2-201ENST00000604432 568 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 RPL23AP88-201ENST00000605759 454 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 AC093732.2-201ENST00000607950 274 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 MIR3670-4-201ENST00000612260 65 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 AP000676.4-201ENST00000624659 623 ntBASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RTN4IP1Q8WWV3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.29□□□□□ -2.04
RTN4IP1Q8WWV3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.29□□□□□ -2.04
RTN4IP1Q8WWV3 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
RTN4IP1Q8WWV3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
RTN4IP1Q8WWV3 GDI2P1-201ENST00000429312 1336 ntBASIC2.29□□□□□ -2.04
RTN4IP1Q8WWV3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.29□□□□□ -2.04
RTN4IP1Q8WWV3 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RTN4IP1Q8WWV3 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RTN4IP1Q8WWV3 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
RTN4IP1Q8WWV3 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
RTN4IP1Q8WWV3 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
RTN4IP1Q8WWV3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.29□□□□□ -2.04
RTN4IP1Q8WWV3 RNA5SP38-201ENST00000410750 119 ntBASIC2.29□□□□□ -2.04
RTN4IP1Q8WWV3 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.29□□□□□ -2.04
RTN4IP1Q8WWV3 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.29□□□□□ -2.04
RTN4IP1Q8WWV3 AL139132.1-201ENST00000431587 344 ntBASIC2.29□□□□□ -2.04
RTN4IP1Q8WWV3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.29□□□□□ -2.04
RTN4IP1Q8WWV3 AC092427.1-201ENST00000439177 601 ntBASIC2.29□□□□□ -2.04
RTN4IP1Q8WWV3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.29□□□□□ -2.04
RTN4IP1Q8WWV3 USP9YP34-201ENST00000453983 808 ntBASIC2.29□□□□□ -2.04
RTN4IP1Q8WWV3 AP000705.1-201ENST00000454567 350 ntBASIC2.29□□□□□ -2.04
RTN4IP1Q8WWV3 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.29□□□□□ -2.04
RTN4IP1Q8WWV3 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.29□□□□□ -2.04
RTN4IP1Q8WWV3 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.29□□□□□ -2.04
RTN4IP1Q8WWV3 PNPLA4P1-201ENST00000458328 305 ntBASIC2.29□□□□□ -2.04
RTN4IP1Q8WWV3 RNA5SP310-201ENST00000459084 116 ntBASIC2.29□□□□□ -2.04
RTN4IP1Q8WWV3 AC005410.1-202ENST00000460347 485 ntBASIC2.29□□□□□ -2.04
RTN4IP1Q8WWV3 AC090525.1-201ENST00000479116 478 ntBASIC2.29□□□□□ -2.04
RTN4IP1Q8WWV3 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.29□□□□□ -2.04
RTN4IP1Q8WWV3 AC134050.1-201ENST00000495088 933 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms