Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.55□□□□□ -1.84
SLC44A1Q8WWI5 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.55□□□□□ -1.84
SLC44A1Q8WWI5 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.55□□□□□ -1.84
SLC44A1Q8WWI5 ZNF192P1-203ENST00000565888 810 ntBASIC3.55□□□□□ -1.84
SLC44A1Q8WWI5 SNRPGP15-201ENST00000600149 222 ntBASIC3.55□□□□□ -1.84
SLC44A1Q8WWI5 AC122108.2-201ENST00000611946 526 ntBASIC3.55□□□□□ -1.84
SLC44A1Q8WWI5 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
SLC44A1Q8WWI5 AC034229.5-201ENST00000624258 185 ntBASIC3.55□□□□□ -1.84
SLC44A1Q8WWI5 AL603839.4-201ENST00000624658 1005 ntBASIC3.55□□□□□ -1.84
SLC44A1Q8WWI5 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.55□□□□□ -1.84
SLC44A1Q8WWI5 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
SLC44A1Q8WWI5 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SLC44A1Q8WWI5 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
SLC44A1Q8WWI5 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.55□□□□□ -1.84
SLC44A1Q8WWI5 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 AC092104.1-201ENST00000497346 1441 ntBASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 AL157700.1-201ENST00000561973 1432 ntBASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 RNU1-75P-201ENST00000347264 129 ntBASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 RNU6-97P-201ENST00000363387 104 ntBASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 MIR23B-201ENST00000384832 97 ntBASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 RNU2-37P-201ENST00000410695 177 ntBASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 CDK8P2-201ENST00000415020 547 ntBASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 AL445584.1-201ENST00000431451 330 ntBASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 AP1S2P1-201ENST00000457344 379 ntBASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 AC023598.1-201ENST00000472521 361 ntBASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 AC021382.1-201ENST00000483523 359 ntBASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 RPL21P129-201ENST00000491732 478 ntBASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 AC112204.1-201ENST00000502591 103 ntBASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 AC079140.3-201ENST00000511111 550 ntBASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 AC007991.1-201ENST00000522680 631 ntBASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 MTND4LP18-201ENST00000526864 291 ntBASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 AP003497.1-201ENST00000528472 562 ntBASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 MIR548AB-201ENST00000584917 84 ntBASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 AC005771.1-201ENST00000585581 349 ntBASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 AC245389.1-201ENST00000605141 529 ntBASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 AL451086.1-201ENST00000605596 223 ntBASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 AC011816.2-201ENST00000607089 556 ntBASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 AC100793.4-201ENST00000613683 429 ntBASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 AC006133.1-201ENST00000617106 264 ntBASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 AC002550.2-201ENST00000621246 394 ntBASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 AL356585.4-201ENST00000623078 1229 ntBASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 AP003355.3-201ENST00000623465 114 ntBASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 AC112200.1-201ENST00000625015 234 ntBASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SLC44A1Q8WWI5 AC010733.2-201ENST00000589496 5702 ntBASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 MFSD8-233ENST00000641482 4860 ntBASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 RNU6-533P-201ENST00000384144 107 ntBASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 SNORA75-201ENST00000384158 137 ntBASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 RNU6-809P-201ENST00000384461 107 ntBASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 AL583834.1-201ENST00000406943 343 ntBASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 Y_RNA.598-201ENST00000410480 95 ntBASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 Y_RNA.608-201ENST00000410647 95 ntBASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 HMGN1P14-201ENST00000412459 517 ntBASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 AC007899.1-201ENST00000412776 775 ntBASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 AC017079.2-201ENST00000416102 485 ntBASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 AL356583.2-201ENST00000426536 280 ntBASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 USP9YP12-201ENST00000450481 570 ntBASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 MTND1P9-201ENST00000453775 944 ntBASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 Z82190.1-201ENST00000454534 490 ntBASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 MTCO1P42-201ENST00000457379 726 ntBASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 ARL2BPP4-201ENST00000506854 471 ntBASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 AC005921.1-201ENST00000510589 286 ntBASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 AC023141.12-201ENST00000512399 199 ntBASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 SNORA67.7-201ENST00000516664 135 ntBASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 PAICSP4-201ENST00000517543 1253 ntBASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 AP002748.2-201ENST00000528671 348 ntBASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 AC022878.1-201ENST00000530684 149 ntBASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 AP004242.1-201ENST00000533701 349 ntBASIC3.53□□□□□ -1.84
SLC44A1Q8WWI5 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms