Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL139421.1-201ENST00000423010 169 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 MRPS10P2-201ENST00000431226 381 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.61□□□□□ -1.83
SNED1Q8TER0 RPL21P112-201ENST00000434403 463 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.61□□□□□ -1.83
SNED1Q8TER0 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.61□□□□□ -1.83
SNED1Q8TER0 ARL5AP2-201ENST00000444698 533 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.61□□□□□ -1.83
SNED1Q8TER0 CFTRP1-201ENST00000456646 183 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 AL024509.2-201ENST00000493462 493 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 AC104090.1-201ENST00000506341 1171 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 CDC42P4-201ENST00000510507 563 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.61□□□□□ -1.83
SNED1Q8TER0 RN7SKP234-201ENST00000517173 224 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 AC104027.1-201ENST00000521887 300 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 AP002963.1-201ENST00000530590 184 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.61□□□□□ -1.83
SNED1Q8TER0 MTCO3P24-201ENST00000572729 782 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 MIR3912-201ENST00000577566 105 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.61□□□□□ -1.83
SNED1Q8TER0 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SNED1Q8TER0 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.61□□□□□ -1.83
SNED1Q8TER0 WISP1-OT1-201ENST00000602893 642 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 AP003973.1-201ENST00000604639 691 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 BNIP3P10-201ENST00000605360 577 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 AC109347.2-201ENST00000610220 349 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 TUG1_1.1-201ENST00000610654 145 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 AL607023.1-201ENST00000620045 248 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 AC024595.1-201ENST00000623088 387 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 AL049780.3-201ENST00000624612 1583 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SNED1Q8TER0 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SNED1Q8TER0 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
SNED1Q8TER0 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.61□□□□□ -1.83
SNED1Q8TER0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SNED1Q8TER0 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SNED1Q8TER0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SNED1Q8TER0 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SNED1Q8TER0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SNED1Q8TER0 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
SNED1Q8TER0 RPL7P26-201ENST00000333817 754 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 RNU1-75P-201ENST00000347264 129 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SNED1Q8TER0 RNA5SP391-201ENST00000363456 119 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
SNED1Q8TER0 SNORA70E-201ENST00000384492 135 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 Y_RNA.516-201ENST00000384541 124 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 DEFB108C-201ENST00000400154 252 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 BMS1P22-201ENST00000414726 313 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 PAICSP7-201ENST00000419829 962 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 SUMO2P2-201ENST00000456482 255 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 CDC42P1-201ENST00000456658 548 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 RN7SL20P-201ENST00000488827 297 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 AC079140.3-201ENST00000511111 550 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 PRELID3BP4-201ENST00000515476 571 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 RNU6-678P-201ENST00000516832 109 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.61□□□□□ -1.83
SNED1Q8TER0 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.61□□□□□ -1.83
SNED1Q8TER0 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.61□□□□□ -1.83
SNED1Q8TER0 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.61□□□□□ -1.83
SNED1Q8TER0 ROCK1P1-201ENST00000573767 549 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.61□□□□□ -1.83
SNED1Q8TER0 BNIP3P26-201ENST00000600827 554 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 U73023.1-201ENST00000603134 700 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 AC015871.2-201ENST00000603605 948 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.61□□□□□ -1.83
SNED1Q8TER0 AC011374.2-201ENST00000607135 526 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 AC138749.5-201ENST00000611461 208 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 AC078899.5-201ENST00000612475 178 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 AL592295.2-201ENST00000612578 206 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 AC007318.2-201ENST00000620999 243 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 PLCE1P1-201ENST00000622094 305 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 AL008636.1-201ENST00000625038 1018 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 MIR4496-201ENST00000635896 61 ntBASIC3.61□□□□□ -1.83
SNED1Q8TER0 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
SNED1Q8TER0 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SNED1Q8TER0 AC008725.1-201ENST00000605123 2263 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SNED1Q8TER0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SNED1Q8TER0 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SNED1Q8TER0 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SNED1Q8TER0 RNA5SP167-201ENST00000365461 116 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.6□□□□□ -1.83
SNED1Q8TER0 AL133264.1-201ENST00000407157 562 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SNED1Q8TER0 RN7SKP142-201ENST00000411236 328 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 RNU2-6P-201ENST00000411404 190 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 RAC1P3-201ENST00000416129 580 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 RPL21P40-201ENST00000428586 483 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 AL590103.1-201ENST00000434488 307 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 USP9YP7-201ENST00000436723 430 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 RPS7P5-201ENST00000441482 581 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.6□□□□□ -1.83
SNED1Q8TER0 USP9YP32-201ENST00000452432 430 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 RPL21P134-201ENST00000453468 483 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.6□□□□□ -1.83
SNED1Q8TER0 RPL7P18-201ENST00000478965 734 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms