Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 PDCD5P1-201ENST00000543528 309 ntBASIC1.6□□□□□ -2.15
CHD6Q8TD26 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC1.6□□□□□ -2.15
CHD6Q8TD26 MIR5000-201ENST00000577717 103 ntBASIC1.6□□□□□ -2.15
CHD6Q8TD26 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.59□□□□□ -2.15
CHD6Q8TD26 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.59□□□□□ -2.15
CHD6Q8TD26 RPL21P2-201ENST00000440049 481 ntBASIC1.59□□□□□ -2.15
CHD6Q8TD26 CBWD4P-201ENST00000445695 655 ntBASIC1.59□□□□□ -2.15
CHD6Q8TD26 AP002345.1-201ENST00000456493 928 ntBASIC1.59□□□□□ -2.15
CHD6Q8TD26 NDUFB4P9-201ENST00000511646 388 ntBASIC1.59□□□□□ -2.15
CHD6Q8TD26 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.59□□□□□ -2.15
CHD6Q8TD26 AC073387.2-201ENST00000604797 784 ntBASIC1.59□□□□□ -2.15
CHD6Q8TD26 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
CHD6Q8TD26 RNU1-139P-201ENST00000391307 165 ntBASIC1.59□□□□□ -2.16
CHD6Q8TD26 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.59□□□□□ -2.16
CHD6Q8TD26 RNU6-405P-201ENST00000516637 110 ntBASIC1.59□□□□□ -2.16
CHD6Q8TD26 RNU6-467P-201ENST00000517027 110 ntBASIC1.59□□□□□ -2.16
CHD6Q8TD26 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC1.59□□□□□ -2.16
CHD6Q8TD26 VN1R7P-201ENST00000619242 903 ntBASIC1.59□□□□□ -2.16
CHD6Q8TD26 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CHD6Q8TD26 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
CHD6Q8TD26 CST2P1-201ENST00000425770 87 ntBASIC1.58□□□□□ -2.16
CHD6Q8TD26 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.58□□□□□ -2.16
CHD6Q8TD26 MIR338-201ENST00000636369 67 ntBASIC1.58□□□□□ -2.16
CHD6Q8TD26 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC1.58□□□□□ -2.16
CHD6Q8TD26 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
CHD6Q8TD26 RNU1-138P-201ENST00000384093 164 ntBASIC1.58□□□□□ -2.16
CHD6Q8TD26 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC1.58□□□□□ -2.16
CHD6Q8TD26 AL365400.1-201ENST00000431854 640 ntBASIC1.58□□□□□ -2.16
CHD6Q8TD26 RPL23AP62-201ENST00000463396 453 ntBASIC1.58□□□□□ -2.16
CHD6Q8TD26 AC107015.1-201ENST00000466902 747 ntBASIC1.58□□□□□ -2.16
CHD6Q8TD26 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.58□□□□□ -2.16
CHD6Q8TD26 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
CHD6Q8TD26 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC1.58□□□□□ -2.16
CHD6Q8TD26 AC091488.1-201ENST00000604239 660 ntBASIC1.58□□□□□ -2.16
CHD6Q8TD26 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC1.58□□□□□ -2.16
CHD6Q8TD26 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.57□□□□□ -2.16
CHD6Q8TD26 AL354695.1-201ENST00000427935 228 ntBASIC1.57□□□□□ -2.16
CHD6Q8TD26 RN7SL274P-201ENST00000492268 272 ntBASIC1.57□□□□□ -2.16
CHD6Q8TD26 MIR5002-201ENST00000584713 97 ntBASIC1.57□□□□□ -2.16
CHD6Q8TD26 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.57□□□□□ -2.16
CHD6Q8TD26 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.57□□□□□ -2.16
CHD6Q8TD26 AC091152.2-201ENST00000591628 2569 ntBASIC1.57□□□□□ -2.16
CHD6Q8TD26 MTND4P23-201ENST00000447723 1363 ntBASIC1.57□□□□□ -2.16
CHD6Q8TD26 AC010680.1-201ENST00000590024 3590 ntBASIC1.57□□□□□ -2.16
CHD6Q8TD26 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CHD6Q8TD26 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CHD6Q8TD26 SNORD21-201ENST00000383953 95 ntBASIC1.57□□□□□ -2.16
CHD6Q8TD26 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.57□□□□□ -2.16
CHD6Q8TD26 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.57□□□□□ -2.16
CHD6Q8TD26 snoU13.3-201ENST00000459441 104 ntBASIC1.57□□□□□ -2.16
CHD6Q8TD26 GZMAP1-201ENST00000503054 631 ntBASIC1.57□□□□□ -2.16
CHD6Q8TD26 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.57□□□□□ -2.16
CHD6Q8TD26 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.57□□□□□ -2.16
CHD6Q8TD26 AC005034.5-201ENST00000604219 466 ntBASIC1.57□□□□□ -2.16
CHD6Q8TD26 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CHD6Q8TD26 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
CHD6Q8TD26 XIAPP3-201ENST00000312918 795 ntBASIC1.56□□□□□ -2.16
CHD6Q8TD26 RNU6-1080P-201ENST00000383982 107 ntBASIC1.56□□□□□ -2.16
CHD6Q8TD26 AC009965.2-201ENST00000425328 970 ntBASIC1.56□□□□□ -2.16
CHD6Q8TD26 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC1.56□□□□□ -2.16
CHD6Q8TD26 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC1.56□□□□□ -2.16
CHD6Q8TD26 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.56□□□□□ -2.16
CHD6Q8TD26 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.56□□□□□ -2.16
CHD6Q8TD26 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.56□□□□□ -2.16
CHD6Q8TD26 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CHD6Q8TD26 FAM35CP-201ENST00000554755 2470 ntBASIC1.56□□□□□ -2.16
CHD6Q8TD26 MTCYBP12-201ENST00000440559 1134 ntBASIC1.56□□□□□ -2.16
CHD6Q8TD26 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.56□□□□□ -2.16
CHD6Q8TD26 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.56□□□□□ -2.16
CHD6Q8TD26 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.56□□□□□ -2.16
CHD6Q8TD26 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.56□□□□□ -2.16
CHD6Q8TD26 RNA5SP436-201ENST00000516020 115 ntBASIC1.56□□□□□ -2.16
CHD6Q8TD26 AC023825.1-201ENST00000566704 1030 ntBASIC1.56□□□□□ -2.16
CHD6Q8TD26 AC010297.1-201ENST00000623948 149 ntBASIC1.56□□□□□ -2.16
CHD6Q8TD26 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.56□□□□□ -2.16
CHD6Q8TD26 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CHD6Q8TD26 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CHD6Q8TD26 MIR6073-201ENST00000352083 89 ntBASIC1.55□□□□□ -2.16
CHD6Q8TD26 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
CHD6Q8TD26 Y_RNA.136-201ENST00000363444 102 ntBASIC1.55□□□□□ -2.16
CHD6Q8TD26 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC1.55□□□□□ -2.16
CHD6Q8TD26 AC018630.2-202ENST00000422992 927 ntBASIC1.55□□□□□ -2.16
CHD6Q8TD26 AIMP1P2-201ENST00000425294 312 ntBASIC1.55□□□□□ -2.16
CHD6Q8TD26 RPS6P15-201ENST00000431996 751 ntBASIC1.55□□□□□ -2.16
CHD6Q8TD26 CALM1P1-201ENST00000442082 433 ntBASIC1.55□□□□□ -2.16
CHD6Q8TD26 MTCO1P48-201ENST00000448024 1096 ntBASIC1.55□□□□□ -2.16
CHD6Q8TD26 RNU6-1132P-201ENST00000459214 107 ntBASIC1.55□□□□□ -2.16
CHD6Q8TD26 AC079203.1-201ENST00000487972 404 ntBASIC1.55□□□□□ -2.16
CHD6Q8TD26 EEF1B2P4-201ENST00000551398 348 ntBASIC1.55□□□□□ -2.16
CHD6Q8TD26 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.55□□□□□ -2.16
CHD6Q8TD26 AL137072.1-201ENST00000603444 466 ntBASIC1.55□□□□□ -2.16
CHD6Q8TD26 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC1.55□□□□□ -2.16
CHD6Q8TD26 MKKS-204ENST00000639674 192 ntBASIC1.55□□□□□ -2.16
CHD6Q8TD26 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.55□□□□□ -2.16
CHD6Q8TD26 RNU6-60P-201ENST00000364792 103 ntBASIC1.55□□□□□ -2.16
CHD6Q8TD26 MUPP-201ENST00000438111 566 ntBASIC1.55□□□□□ -2.16
CHD6Q8TD26 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.55□□□□□ -2.16
CHD6Q8TD26 AP000705.1-201ENST00000454567 350 ntBASIC1.55□□□□□ -2.16
CHD6Q8TD26 AC068135.2-201ENST00000569293 1028 ntBASIC1.55□□□□□ -2.16
CHD6Q8TD26 AC013444.2-201ENST00000603317 787 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms