Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 RPS17P13-201ENST00000448974 407 ntBASIC4.06□□□□□ -1.76
CPEB3Q8NE35 AL162591.2-201ENST00000449634 317 ntBASIC4.06□□□□□ -1.76
CPEB3Q8NE35 HMGB3P21-201ENST00000452483 547 ntBASIC4.06□□□□□ -1.76
CPEB3Q8NE35 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.06□□□□□ -1.76
CPEB3Q8NE35 AL162395.1-201ENST00000457882 422 ntBASIC4.06□□□□□ -1.76
CPEB3Q8NE35 S100A11P1-201ENST00000477525 312 ntBASIC4.06□□□□□ -1.76
CPEB3Q8NE35 AC025164.1-201ENST00000496249 478 ntBASIC4.06□□□□□ -1.76
CPEB3Q8NE35 KLHL2P1-201ENST00000508691 521 ntBASIC4.06□□□□□ -1.76
CPEB3Q8NE35 RN7SKP82-201ENST00000516786 223 ntBASIC4.06□□□□□ -1.76
CPEB3Q8NE35 MYL12AP1-201ENST00000518490 515 ntBASIC4.06□□□□□ -1.76
CPEB3Q8NE35 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.06□□□□□ -1.76
CPEB3Q8NE35 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.06□□□□□ -1.76
CPEB3Q8NE35 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.06□□□□□ -1.76
CPEB3Q8NE35 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.06□□□□□ -1.76
CPEB3Q8NE35 AP000942.4-201ENST00000604811 241 ntBASIC4.06□□□□□ -1.76
CPEB3Q8NE35 AL022345.1-201ENST00000607292 135 ntBASIC4.06□□□□□ -1.76
CPEB3Q8NE35 AL133215.3-201ENST00000609801 448 ntBASIC4.06□□□□□ -1.76
CPEB3Q8NE35 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.06□□□□□ -1.76
CPEB3Q8NE35 AP001486.3-201ENST00000615334 372 ntBASIC4.06□□□□□ -1.76
CPEB3Q8NE35 RMST_9.1-201ENST00000619945 193 ntBASIC4.06□□□□□ -1.76
CPEB3Q8NE35 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CPEB3Q8NE35 AL672167.1-203ENST00000641299 2975 ntBASIC4.06□□□□□ -1.76
CPEB3Q8NE35 AL359893.1-201ENST00000447628 1580 ntBASIC4.06□□□□□ -1.76
CPEB3Q8NE35 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.06□□□□□ -1.76
CPEB3Q8NE35 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CPEB3Q8NE35 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.05□□□□□ -1.76
CPEB3Q8NE35 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CPEB3Q8NE35 MTND4P27-201ENST00000450813 1354 ntBASIC4.05□□□□□ -1.76
CPEB3Q8NE35 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CPEB3Q8NE35 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CPEB3Q8NE35 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.05□□□□□ -1.76
CPEB3Q8NE35 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CPEB3Q8NE35 Y_RNA.301-201ENST00000364990 103 ntBASIC4.05□□□□□ -1.76
CPEB3Q8NE35 SNORD42.2-201ENST00000365570 69 ntBASIC4.05□□□□□ -1.76
CPEB3Q8NE35 Y_RNA.373-201ENST00000365600 103 ntBASIC4.05□□□□□ -1.76
CPEB3Q8NE35 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CPEB3Q8NE35 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.05□□□□□ -1.76
CPEB3Q8NE35 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CPEB3Q8NE35 Y_RNA.579-201ENST00000390939 94 ntBASIC4.05□□□□□ -1.76
CPEB3Q8NE35 AL136372.1-201ENST00000403060 228 ntBASIC4.05□□□□□ -1.76
CPEB3Q8NE35 AL359634.1-202ENST00000404721 284 ntBASIC4.05□□□□□ -1.76
CPEB3Q8NE35 MIR548P-201ENST00000408336 84 ntBASIC4.05□□□□□ -1.76
CPEB3Q8NE35 AC009237.10-201ENST00000414112 510 ntBASIC4.05□□□□□ -1.76
CPEB3Q8NE35 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.05□□□□□ -1.76
CPEB3Q8NE35 AL138785.1-201ENST00000425821 331 ntBASIC4.05□□□□□ -1.76
CPEB3Q8NE35 FABP7P2-201ENST00000429946 379 ntBASIC4.05□□□□□ -1.76
CPEB3Q8NE35 RPS26P2-201ENST00000440331 348 ntBASIC4.05□□□□□ -1.76
CPEB3Q8NE35 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.05□□□□□ -1.76
CPEB3Q8NE35 CYCSP34-201ENST00000458172 304 ntBASIC4.05□□□□□ -1.76
CPEB3Q8NE35 RNU7-66P-201ENST00000459469 62 ntBASIC4.05□□□□□ -1.76
CPEB3Q8NE35 AC053481.1-201ENST00000467217 306 ntBASIC4.05□□□□□ -1.76
CPEB3Q8NE35 RPL36AP41-201ENST00000493820 306 ntBASIC4.05□□□□□ -1.76
CPEB3Q8NE35 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.05□□□□□ -1.76
CPEB3Q8NE35 SNORD116-26-201ENST00000516006 96 ntBASIC4.05□□□□□ -1.76
CPEB3Q8NE35 RNA5SP503-201ENST00000517047 117 ntBASIC4.05□□□□□ -1.76
CPEB3Q8NE35 RNU6-64P-201ENST00000517119 105 ntBASIC4.05□□□□□ -1.76
CPEB3Q8NE35 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.05□□□□□ -1.76
CPEB3Q8NE35 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.05□□□□□ -1.76
CPEB3Q8NE35 AP001804.3-201ENST00000525146 880 ntBASIC4.05□□□□□ -1.76
CPEB3Q8NE35 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.05□□□□□ -1.76
CPEB3Q8NE35 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.05□□□□□ -1.76
CPEB3Q8NE35 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.05□□□□□ -1.76
CPEB3Q8NE35 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.05□□□□□ -1.76
CPEB3Q8NE35 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.05□□□□□ -1.76
CPEB3Q8NE35 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.05□□□□□ -1.76
CPEB3Q8NE35 NCAPGP2-201ENST00000557911 754 ntBASIC4.05□□□□□ -1.76
CPEB3Q8NE35 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.05□□□□□ -1.76
CPEB3Q8NE35 FRG2DP-202ENST00000566967 323 ntBASIC4.05□□□□□ -1.76
CPEB3Q8NE35 AC015912.2-201ENST00000571053 181 ntBASIC4.05□□□□□ -1.76
CPEB3Q8NE35 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.05□□□□□ -1.76
CPEB3Q8NE35 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.05□□□□□ -1.76
CPEB3Q8NE35 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.05□□□□□ -1.76
CPEB3Q8NE35 RNF138P2-201ENST00000603490 592 ntBASIC4.05□□□□□ -1.76
CPEB3Q8NE35 LLPHP1-201ENST00000603571 367 ntBASIC4.05□□□□□ -1.76
CPEB3Q8NE35 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CPEB3Q8NE35 AC011155.2-201ENST00000623202 216 ntBASIC4.05□□□□□ -1.76
CPEB3Q8NE35 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CPEB3Q8NE35 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.05□□□□□ -1.76
CPEB3Q8NE35 IQCB2P-201ENST00000401788 1633 ntBASIC4.05□□□□□ -1.76
CPEB3Q8NE35 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.05□□□□□ -1.76
CPEB3Q8NE35 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.05□□□□□ -1.76
CPEB3Q8NE35 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CPEB3Q8NE35 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 AC008725.1-201ENST00000605123 2263 ntBASIC4.04□□□□□ -1.76
CPEB3Q8NE35 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 RN7SKP44-201ENST00000363602 316 ntBASIC4.04□□□□□ -1.76
CPEB3Q8NE35 Y_RNA.167-201ENST00000363735 109 ntBASIC4.04□□□□□ -1.76
CPEB3Q8NE35 RNU6-1078P-201ENST00000364522 103 ntBASIC4.04□□□□□ -1.76
CPEB3Q8NE35 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 RNU6-339P-201ENST00000384310 107 ntBASIC4.04□□□□□ -1.76
CPEB3Q8NE35 RNU6-738P-201ENST00000384531 106 ntBASIC4.04□□□□□ -1.76
CPEB3Q8NE35 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CPEB3Q8NE35 SNORA75.4-201ENST00000391278 119 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms