Protein–RNA interactions for Protein: Q8N6Y0

USHBP1, Usher syndrome type-1C protein-binding protein 1, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1Q8N6Y0 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.31□□□□□ -1.56
USHBP1Q8N6Y0 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.31□□□□□ -1.56
USHBP1Q8N6Y0 AC005668.1-201ENST00000571142 476 ntBASIC5.31□□□□□ -1.56
USHBP1Q8N6Y0 AC004853.1-201ENST00000604902 698 ntBASIC5.31□□□□□ -1.56
USHBP1Q8N6Y0 MIR432-201ENST00000606207 94 ntBASIC5.31□□□□□ -1.56
USHBP1Q8N6Y0 AL355816.1-201ENST00000607951 118 ntBASIC5.31□□□□□ -1.56
USHBP1Q8N6Y0 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.31□□□□□ -1.56
USHBP1Q8N6Y0 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC5.31□□□□□ -1.56
USHBP1Q8N6Y0 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
USHBP1Q8N6Y0 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.31□□□□□ -1.56
USHBP1Q8N6Y0 AC107081.3-201ENST00000612715 2034 ntBASIC5.31□□□□□ -1.56
USHBP1Q8N6Y0 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
USHBP1Q8N6Y0 AC114546.3-201ENST00000623582 1734 ntBASIC5.31□□□□□ -1.56
USHBP1Q8N6Y0 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.31□□□□□ -1.56
USHBP1Q8N6Y0 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USHBP1Q8N6Y0 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.31□□□□□ -1.56
USHBP1Q8N6Y0 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
USHBP1Q8N6Y0 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.31□□□□□ -1.56
USHBP1Q8N6Y0 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 MTND4P35-201ENST00000604257 1375 ntBASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 AP001642.1-201ENST00000624727 2117 ntBASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 ZBTB8OSP1-201ENST00000342688 498 ntBASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 Y_RNA.384-201ENST00000383909 102 ntBASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 SNORA32.2-201ENST00000384049 122 ntBASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 MIR449B-201ENST00000384995 97 ntBASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 CRYBB2P1-203ENST00000415709 538 ntBASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 YWHAZP8-201ENST00000436935 731 ntBASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 RPL23AP89-201ENST00000439324 255 ntBASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 MTCO2P29-201ENST00000465212 189 ntBASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 RPS15AP36-201ENST00000492022 382 ntBASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 AC026726.1-201ENST00000512859 601 ntBASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 SCARNA14-201ENST00000516903 136 ntBASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 AC090572.1-201ENST00000519251 160 ntBASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 AC107953.1-201ENST00000522216 297 ntBASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 AL133215.3-201ENST00000609801 448 ntBASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 AC105429.2-201ENST00000610567 517 ntBASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 AC092447.10-201ENST00000620607 1652 ntBASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 AL022322.2-201ENST00000624072 20397 ntBASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 AC010329.2-201ENST00000595195 2737 ntBASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.3□□□□□ -1.56
USHBP1Q8N6Y0 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 SNORD3H-201ENST00000384486 214 ntBASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 VDAC1P9-201ENST00000412766 841 ntBASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 AC006548.1-201ENST00000427470 102 ntBASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 SRIP2-201ENST00000428470 166 ntBASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 RPS15AP9-201ENST00000439856 381 ntBASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 RNU7-63P-201ENST00000459054 62 ntBASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 RNA5SP103-201ENST00000459503 118 ntBASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 AP000893.1-201ENST00000474462 794 ntBASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 AC012158.1-204ENST00000483430 465 ntBASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 RPL38P4-201ENST00000502376 214 ntBASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 AC112206.3-201ENST00000514578 389 ntBASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 RN7SKP46-201ENST00000515942 234 ntBASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 RN7SKP116-201ENST00000516902 319 ntBASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 AL356432.3-201ENST00000568952 465 ntBASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 KC877982.1-201ENST00000602313 470 ntBASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 SNORA51-201ENST00000606420 132 ntBASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 AL391813.2-201ENST00000609113 322 ntBASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.29□□□□□ -1.56
USHBP1Q8N6Y0 CR381572.1-201ENST00000625098 102 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms