Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 CD24P4-201ENST00000382840 243 ntBASIC2.51□□□□□ -2.01
VPS8Q8N3P4 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS8Q8N3P4 SUMO1P4-201ENST00000429430 302 ntBASIC2.51□□□□□ -2.01
VPS8Q8N3P4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS8Q8N3P4 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.51□□□□□ -2.01
VPS8Q8N3P4 HMGN1P8-201ENST00000463578 288 ntBASIC2.51□□□□□ -2.01
VPS8Q8N3P4 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS8Q8N3P4 AC090096.1-201ENST00000489168 390 ntBASIC2.51□□□□□ -2.01
VPS8Q8N3P4 OR4U1P-201ENST00000554958 912 ntBASIC2.51□□□□□ -2.01
VPS8Q8N3P4 AL161912.3-201ENST00000605404 628 ntBASIC2.51□□□□□ -2.01
VPS8Q8N3P4 AC068831.7-201ENST00000616954 363 ntBASIC2.51□□□□□ -2.01
VPS8Q8N3P4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
VPS8Q8N3P4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.5□□□□□ -2.01
VPS8Q8N3P4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
VPS8Q8N3P4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
VPS8Q8N3P4 ADAM3A-203ENST00000461344 2157 ntBASIC2.5□□□□□ -2.01
VPS8Q8N3P4 MIR144-201ENST00000384886 86 ntBASIC2.5□□□□□ -2.01
VPS8Q8N3P4 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.5□□□□□ -2.01
VPS8Q8N3P4 RPS3AP9-201ENST00000417027 792 ntBASIC2.5□□□□□ -2.01
VPS8Q8N3P4 HMGN2P38-201ENST00000423806 265 ntBASIC2.5□□□□□ -2.01
VPS8Q8N3P4 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.5□□□□□ -2.01
VPS8Q8N3P4 BNIP3P2-201ENST00000441221 577 ntBASIC2.5□□□□□ -2.01
VPS8Q8N3P4 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.5□□□□□ -2.01
VPS8Q8N3P4 RPS29P12-201ENST00000460178 152 ntBASIC2.5□□□□□ -2.01
VPS8Q8N3P4 RNA5SP82-201ENST00000516707 92 ntBASIC2.5□□□□□ -2.01
VPS8Q8N3P4 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.5□□□□□ -2.01
VPS8Q8N3P4 OR4V1P-201ENST00000525394 1140 ntBASIC2.5□□□□□ -2.01
VPS8Q8N3P4 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.5□□□□□ -2.01
VPS8Q8N3P4 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.5□□□□□ -2.01
VPS8Q8N3P4 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.5□□□□□ -2.01
VPS8Q8N3P4 SNORD84-203ENST00000584275 78 ntBASIC2.5□□□□□ -2.01
VPS8Q8N3P4 AC020895.1-201ENST00000595362 272 ntBASIC2.5□□□□□ -2.01
VPS8Q8N3P4 AL645939.4-201ENST00000604495 135 ntBASIC2.5□□□□□ -2.01
VPS8Q8N3P4 AC034236.3-201ENST00000605999 461 ntBASIC2.5□□□□□ -2.01
VPS8Q8N3P4 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.5□□□□□ -2.01
VPS8Q8N3P4 AC109780.2-201ENST00000413467 845 ntBASIC2.49□□□□□ -2.01
VPS8Q8N3P4 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.49□□□□□ -2.01
VPS8Q8N3P4 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.49□□□□□ -2.01
VPS8Q8N3P4 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.49□□□□□ -2.01
VPS8Q8N3P4 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.49□□□□□ -2.01
VPS8Q8N3P4 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.49□□□□□ -2.01
VPS8Q8N3P4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.49□□□□□ -2.01
VPS8Q8N3P4 ACTR3BP3-201ENST00000565577 979 ntBASIC2.49□□□□□ -2.01
VPS8Q8N3P4 APOOP1-201ENST00000604695 592 ntBASIC2.49□□□□□ -2.01
VPS8Q8N3P4 AC140725.3-201ENST00000616193 880 ntBASIC2.49□□□□□ -2.01
VPS8Q8N3P4 RNU6-1180P-201ENST00000364935 107 ntBASIC2.48□□□□□ -2.01
VPS8Q8N3P4 RNU6-321P-201ENST00000410912 106 ntBASIC2.48□□□□□ -2.01
VPS8Q8N3P4 AP1B1P2-201ENST00000416196 106 ntBASIC2.48□□□□□ -2.01
VPS8Q8N3P4 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.48□□□□□ -2.01
VPS8Q8N3P4 NAMPTP2-201ENST00000505629 1115 ntBASIC2.48□□□□□ -2.01
VPS8Q8N3P4 RN7SKP234-201ENST00000517173 224 ntBASIC2.48□□□□□ -2.01
VPS8Q8N3P4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.48□□□□□ -2.01
VPS8Q8N3P4 DNAJC8P1-201ENST00000554535 372 ntBASIC2.48□□□□□ -2.01
VPS8Q8N3P4 AC068944.2-201ENST00000610373 403 ntBASIC2.48□□□□□ -2.01
VPS8Q8N3P4 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.48□□□□□ -2.01
VPS8Q8N3P4 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
VPS8Q8N3P4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VPS8Q8N3P4 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.47□□□□□ -2.01
VPS8Q8N3P4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.47□□□□□ -2.01
VPS8Q8N3P4 AC241520.1-201ENST00000422654 1099 ntBASIC2.47□□□□□ -2.01
VPS8Q8N3P4 RPL21P66-201ENST00000426566 466 ntBASIC2.47□□□□□ -2.01
VPS8Q8N3P4 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.47□□□□□ -2.01
VPS8Q8N3P4 AC009901.1-201ENST00000506703 541 ntBASIC2.47□□□□□ -2.01
VPS8Q8N3P4 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
VPS8Q8N3P4 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.47□□□□□ -2.01
VPS8Q8N3P4 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.47□□□□□ -2.01
VPS8Q8N3P4 MYL12BP1-201ENST00000569826 507 ntBASIC2.47□□□□□ -2.01
VPS8Q8N3P4 MIR5194-201ENST00000582634 120 ntBASIC2.47□□□□□ -2.01
VPS8Q8N3P4 AC023043.2-201ENST00000589678 1026 ntBASIC2.47□□□□□ -2.01
VPS8Q8N3P4 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.47□□□□□ -2.01
VPS8Q8N3P4 AC103710.2-202ENST00000641454 2853 ntBASIC2.47□□□□□ -2.01
VPS8Q8N3P4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
VPS8Q8N3P4 RNA5SP393-201ENST00000363423 117 ntBASIC2.46□□□□□ -2.02
VPS8Q8N3P4 RNU6-1027P-201ENST00000383998 107 ntBASIC2.46□□□□□ -2.02
VPS8Q8N3P4 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
VPS8Q8N3P4 RPL23AP36-201ENST00000413895 458 ntBASIC2.46□□□□□ -2.02
VPS8Q8N3P4 BTF3P4-201ENST00000418852 495 ntBASIC2.46□□□□□ -2.02
VPS8Q8N3P4 PPP1R2P5-201ENST00000457256 603 ntBASIC2.46□□□□□ -2.02
VPS8Q8N3P4 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.46□□□□□ -2.02
VPS8Q8N3P4 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.46□□□□□ -2.02
VPS8Q8N3P4 AC125611.2-201ENST00000551907 647 ntBASIC2.46□□□□□ -2.02
VPS8Q8N3P4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.46□□□□□ -2.02
VPS8Q8N3P4 AC245128.3-201ENST00000594721 748 ntBASIC2.46□□□□□ -2.02
VPS8Q8N3P4 AL355816.1-201ENST00000607951 118 ntBASIC2.46□□□□□ -2.02
VPS8Q8N3P4 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.46□□□□□ -2.02
VPS8Q8N3P4 AP003122.6-201ENST00000623831 495 ntBASIC2.46□□□□□ -2.02
VPS8Q8N3P4 Z82209.1-201ENST00000422141 2135 ntBASIC2.46□□□□□ -2.02
VPS8Q8N3P4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
VPS8Q8N3P4 RNU6-1331P-201ENST00000363658 106 ntBASIC2.45□□□□□ -2.02
VPS8Q8N3P4 RNU6-1077P-201ENST00000410506 102 ntBASIC2.45□□□□□ -2.02
VPS8Q8N3P4 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.45□□□□□ -2.02
VPS8Q8N3P4 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.45□□□□□ -2.02
VPS8Q8N3P4 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC2.45□□□□□ -2.02
VPS8Q8N3P4 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
VPS8Q8N3P4 Y_RNA.673-201ENST00000516306 88 ntBASIC2.45□□□□□ -2.02
VPS8Q8N3P4 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.45□□□□□ -2.02
VPS8Q8N3P4 AL035411.2-201ENST00000604022 421 ntBASIC2.45□□□□□ -2.02
VPS8Q8N3P4 AC019159.1-201ENST00000605094 187 ntBASIC2.45□□□□□ -2.02
VPS8Q8N3P4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.45□□□□□ -2.02
VPS8Q8N3P4 AC073055.1-201ENST00000456901 1621 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms