Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AC114947.2-201ENST00000565748 2125 ntBASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 PRO1804-201ENST00000623780 2050 ntBASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 AL590399.2-201ENST00000427536 309 ntBASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 BX323845.3-201ENST00000428215 527 ntBASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 AC087650.1-201ENST00000431445 468 ntBASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 ELOCP18-201ENST00000434209 337 ntBASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 USP9YP7-201ENST00000436723 430 ntBASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 AC073587.1-201ENST00000447093 876 ntBASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 USP9YP32-201ENST00000452432 430 ntBASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 HSPE1P25-201ENST00000455484 251 ntBASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 RN7SKP210-201ENST00000459176 261 ntBASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 AC006539.1-201ENST00000481419 501 ntBASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 AC012158.1-204ENST00000483430 465 ntBASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 LSM3P4-201ENST00000502948 309 ntBASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 RN7SKP277-201ENST00000516895 283 ntBASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 RNU6-840P-201ENST00000517275 65 ntBASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 MIR6793-201ENST00000612376 63 ntBASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 AC240442.1-201ENST00000616055 283 ntBASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 AC073593.1-201ENST00000624500 411 ntBASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 AP002512.4-202ENST00000641599 4530 ntBASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC116Q8IYX3 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 AC007685.1-201ENST00000329806 452 ntBASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 MIR133A2-201ENST00000347538 102 ntBASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 RNU4-90P-201ENST00000362773 141 ntBASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 Y_RNA.240-201ENST00000364469 95 ntBASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 RN7SKP81-201ENST00000365603 331 ntBASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 Y_RNA.398-201ENST00000383952 99 ntBASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 RNU6-22P-201ENST00000384355 107 ntBASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 SNORA12.2-201ENST00000391040 156 ntBASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 SNORA11B-201ENST00000408175 129 ntBASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 RNU6-394P-201ENST00000410735 107 ntBASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 AL096701.2-201ENST00000416920 238 ntBASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 CRIP1P1-201ENST00000427567 185 ntBASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 GAPDHP48-201ENST00000436626 961 ntBASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 MRPL48P1-201ENST00000445390 636 ntBASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 FRG2FP-204ENST00000453982 852 ntBASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 RPL23AP81-201ENST00000455252 467 ntBASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 snoU13.29-201ENST00000459370 104 ntBASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 RN7SL515P-201ENST00000463999 297 ntBASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 AC087477.1-201ENST00000465747 340 ntBASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 RPS18P6-201ENST00000476880 458 ntBASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 RN7SL170P-201ENST00000487098 295 ntBASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 RPS15AP34-201ENST00000487776 387 ntBASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 AC022133.1-201ENST00000490961 571 ntBASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 MIR892C-201ENST00000516410 77 ntBASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 AP006245.1-201ENST00000522549 120 ntBASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 AC023824.2-201ENST00000566185 400 ntBASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 MIR4271-201ENST00000582451 67 ntBASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC116Q8IYX3 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms