Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 RNU6-1287P-201ENST00000362914 107 ntBASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 Y_RNA.167-201ENST00000363735 109 ntBASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 Y_RNA.315-201ENST00000365117 102 ntBASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 SNORD116-29-201ENST00000384516 83 ntBASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 Y_RNA.530-201ENST00000384587 101 ntBASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 RNU6-178P-201ENST00000384631 104 ntBASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 RNU6-1060P-201ENST00000384664 107 ntBASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 MIR606-201ENST00000384851 96 ntBASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 MIR559-201ENST00000385188 96 ntBASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 AL590762.2-201ENST00000395798 571 ntBASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 AL359634.1-202ENST00000404721 284 ntBASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 MIR548P-201ENST00000408336 84 ntBASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 MIR548F5-201ENST00000408421 86 ntBASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 MTCO2P27-201ENST00000420740 428 ntBASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 AC068287.1-201ENST00000430283 295 ntBASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 RPS3AP52-201ENST00000435639 297 ntBASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 RPL35AP22-201ENST00000436855 335 ntBASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 RNU6-1208P-201ENST00000459588 107 ntBASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 AC079804.1-201ENST00000461922 436 ntBASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 AC004801.2-202ENST00000463559 283 ntBASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 Y_RNA.718-201ENST00000517110 102 ntBASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 SNORA25.17-201ENST00000517184 124 ntBASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 BNIP3P25-201ENST00000596023 559 ntBASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 U3.53-201ENST00000628922 216 ntBASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 MIR4496-201ENST00000635896 61 ntBASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM48Q8IWZ4 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 AC005332.5-201ENST00000591222 2919 ntBASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 MFSD8-242ENST00000641690 4199 ntBASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 U3.12-201ENST00000364498 214 ntBASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 RNU6-1297P-201ENST00000384415 104 ntBASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 SOD2P1-201ENST00000396543 562 ntBASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 AL109755.1-201ENST00000401791 649 ntBASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 AP000580.1-201ENST00000404439 358 ntBASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 U3.35-201ENST00000408405 208 ntBASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 RPL21P24-201ENST00000413752 448 ntBASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 GTF2IP13-201ENST00000438487 386 ntBASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 AC002553.2-201ENST00000453217 340 ntBASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 AC234775.1-201ENST00000454247 670 ntBASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 snoU13.1-201ENST00000459157 104 ntBASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 AC108078.2-201ENST00000510750 236 ntBASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 AC005741.1-201ENST00000511094 432 ntBASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 RNU6-1092P-201ENST00000516955 87 ntBASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 AC022790.1-201ENST00000522872 204 ntBASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 AC107918.3-201ENST00000533272 382 ntBASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 FKBP1BP1-201ENST00000553366 325 ntBASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 AC069061.3-201ENST00000582254 823 ntBASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 AC116312.1-201ENST00000606841 314 ntBASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 Z82243.1-201ENST00000609432 473 ntBASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 MIR7703-201ENST00000620784 77 ntBASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 AL161637.1-201ENST00000622380 412 ntBASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 SCN1A-220ENST00000641603 12506 ntBASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 API5P2-201ENST00000397055 1498 ntBASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM48Q8IWZ4 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms