Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 AC098799.2-201ENST00000509466 868 ntBASIC2.56□□□□□ -2
ZNF546Q86UE3 AC006445.2-201ENST00000510061 472 ntBASIC2.56□□□□□ -2
ZNF546Q86UE3 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.56□□□□□ -2
ZNF546Q86UE3 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.56□□□□□ -2
ZNF546Q86UE3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.56□□□□□ -2
ZNF546Q86UE3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.56□□□□□ -2
ZNF546Q86UE3 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.56□□□□□ -2
ZNF546Q86UE3 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.56□□□□□ -2
ZNF546Q86UE3 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.56□□□□□ -2
ZNF546Q86UE3 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.56□□□□□ -2
ZNF546Q86UE3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.56□□□□□ -2
ZNF546Q86UE3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.56□□□□□ -2
ZNF546Q86UE3 MIR3609-201ENST00000582661 80 ntBASIC2.56□□□□□ -2
ZNF546Q86UE3 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.56□□□□□ -2
ZNF546Q86UE3 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC2.56□□□□□ -2
ZNF546Q86UE3 AC008739.2-201ENST00000597006 317 ntBASIC2.56□□□□□ -2
ZNF546Q86UE3 AC080013.3-201ENST00000606839 578 ntBASIC2.56□□□□□ -2
ZNF546Q86UE3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.56□□□□□ -2
ZNF546Q86UE3 MIR378J-201ENST00000611988 109 ntBASIC2.56□□□□□ -2
ZNF546Q86UE3 Z99129.2-201ENST00000619967 314 ntBASIC2.56□□□□□ -2
ZNF546Q86UE3 AL161637.1-201ENST00000622380 412 ntBASIC2.56□□□□□ -2
ZNF546Q86UE3 AC090772.4-201ENST00000623599 362 ntBASIC2.56□□□□□ -2
ZNF546Q86UE3 OR4G3P-201ENST00000633500 913 ntBASIC2.56□□□□□ -2
ZNF546Q86UE3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
ZNF546Q86UE3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.56□□□□□ -2
ZNF546Q86UE3 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.56□□□□□ -2
ZNF546Q86UE3 AP000776.1-201ENST00000530032 1663 ntBASIC2.56□□□□□ -2
ZNF546Q86UE3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ZNF546Q86UE3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.56□□□□□ -2
ZNF546Q86UE3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.56□□□□□ -2
ZNF546Q86UE3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
ZNF546Q86UE3 AL161781.1-201ENST00000354277 403 ntBASIC2.55□□□□□ -2
ZNF546Q86UE3 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.55□□□□□ -2
ZNF546Q86UE3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.55□□□□□ -2
ZNF546Q86UE3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ZNF546Q86UE3 AL359837.1-201ENST00000381357 287 ntBASIC2.55□□□□□ -2
ZNF546Q86UE3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.55□□□□□ -2
ZNF546Q86UE3 RPL36AP36-201ENST00000418616 301 ntBASIC2.55□□□□□ -2
ZNF546Q86UE3 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.55□□□□□ -2
ZNF546Q86UE3 PPP1R11P2-201ENST00000423543 382 ntBASIC2.55□□□□□ -2
ZNF546Q86UE3 BX119904.4-201ENST00000424402 301 ntBASIC2.55□□□□□ -2
ZNF546Q86UE3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.55□□□□□ -2
ZNF546Q86UE3 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.55□□□□□ -2
ZNF546Q86UE3 PTENP1-201ENST00000447117 1215 ntBASIC2.55□□□□□ -2
ZNF546Q86UE3 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.55□□□□□ -2
ZNF546Q86UE3 DUXAP8-207ENST00000456786 622 ntBASIC2.55□□□□□ -2
ZNF546Q86UE3 RPL30P9-201ENST00000465586 330 ntBASIC2.55□□□□□ -2
ZNF546Q86UE3 RPL31P60-201ENST00000478450 367 ntBASIC2.55□□□□□ -2
ZNF546Q86UE3 RPL9P33-201ENST00000484311 566 ntBASIC2.55□□□□□ -2
ZNF546Q86UE3 HMGB1P36-201ENST00000487709 576 ntBASIC2.55□□□□□ -2
ZNF546Q86UE3 MTCO1P9-201ENST00000505577 1534 ntBASIC2.55□□□□□ -2
ZNF546Q86UE3 NPM1P41-201ENST00000512920 831 ntBASIC2.55□□□□□ -2
ZNF546Q86UE3 RNU6-826P-201ENST00000516827 104 ntBASIC2.55□□□□□ -2
ZNF546Q86UE3 TRMT10BP1-201ENST00000519377 943 ntBASIC2.55□□□□□ -2
ZNF546Q86UE3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
ZNF546Q86UE3 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.55□□□□□ -2
ZNF546Q86UE3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.55□□□□□ -2
ZNF546Q86UE3 ELOCP31-201ENST00000540463 467 ntBASIC2.55□□□□□ -2
ZNF546Q86UE3 AC008669.1-201ENST00000565823 2178 ntBASIC2.55□□□□□ -2
ZNF546Q86UE3 MTND1P8-201ENST00000571424 950 ntBASIC2.55□□□□□ -2
ZNF546Q86UE3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.55□□□□□ -2
ZNF546Q86UE3 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.55□□□□□ -2
ZNF546Q86UE3 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.55□□□□□ -2
ZNF546Q86UE3 AL137843.1-201ENST00000605078 385 ntBASIC2.55□□□□□ -2
ZNF546Q86UE3 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.55□□□□□ -2
ZNF546Q86UE3 AL158211.4-201ENST00000606988 584 ntBASIC2.55□□□□□ -2
ZNF546Q86UE3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.55□□□□□ -2
ZNF546Q86UE3 AL020991.1-201ENST00000612314 373 ntBASIC2.55□□□□□ -2
ZNF546Q86UE3 AC068880.5-201ENST00000624331 290 ntBASIC2.55□□□□□ -2
ZNF546Q86UE3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ZNF546Q86UE3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.54□□□□□ -2
ZNF546Q86UE3 ASNSP3-201ENST00000451989 1306 ntBASIC2.54□□□□□ -2
ZNF546Q86UE3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ZNF546Q86UE3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ZNF546Q86UE3 RPL9P7-201ENST00000330965 580 ntBASIC2.54□□□□□ -2
ZNF546Q86UE3 RNU6-97P-201ENST00000363387 104 ntBASIC2.54□□□□□ -2
ZNF546Q86UE3 RNU6-1180P-201ENST00000364935 107 ntBASIC2.54□□□□□ -2
ZNF546Q86UE3 RPL21P17-201ENST00000397467 475 ntBASIC2.54□□□□□ -2
ZNF546Q86UE3 RNU2-25P-201ENST00000411041 191 ntBASIC2.54□□□□□ -2
ZNF546Q86UE3 USP9YP33-201ENST00000412220 421 ntBASIC2.54□□□□□ -2
ZNF546Q86UE3 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.54□□□□□ -2
ZNF546Q86UE3 OR4K11P-201ENST00000431829 904 ntBASIC2.54□□□□□ -2
ZNF546Q86UE3 AC084290.1-201ENST00000434995 374 ntBASIC2.54□□□□□ -2
ZNF546Q86UE3 USP9YP35-201ENST00000435696 412 ntBASIC2.54□□□□□ -2
ZNF546Q86UE3 COX7BP2-201ENST00000437976 242 ntBASIC2.54□□□□□ -2
ZNF546Q86UE3 RPS29P6-201ENST00000438196 145 ntBASIC2.54□□□□□ -2
ZNF546Q86UE3 SNRPEP7-201ENST00000438350 220 ntBASIC2.54□□□□□ -2
ZNF546Q86UE3 EEF1E1P1-201ENST00000446998 430 ntBASIC2.54□□□□□ -2
ZNF546Q86UE3 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.54□□□□□ -2
ZNF546Q86UE3 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.54□□□□□ -2
ZNF546Q86UE3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.54□□□□□ -2
ZNF546Q86UE3 RN7SL385P-201ENST00000468873 276 ntBASIC2.54□□□□□ -2
ZNF546Q86UE3 AC104563.1-201ENST00000476147 376 ntBASIC2.54□□□□□ -2
ZNF546Q86UE3 HSPE1P6-201ENST00000479457 291 ntBASIC2.54□□□□□ -2
ZNF546Q86UE3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.54□□□□□ -2
ZNF546Q86UE3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.54□□□□□ -2
ZNF546Q86UE3 AC024589.1-201ENST00000512207 263 ntBASIC2.54□□□□□ -2
ZNF546Q86UE3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.54□□□□□ -2
ZNF546Q86UE3 RNU6-798P-201ENST00000516912 103 ntBASIC2.54□□□□□ -2
ZNF546Q86UE3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms