Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.45□□□□□ -1.86
LDB1Q86U70 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.45□□□□□ -1.86
LDB1Q86U70 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
LDB1Q86U70 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LDB1Q86U70 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LDB1Q86U70 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.44□□□□□ -1.86
LDB1Q86U70 AL513302.2-201ENST00000562313 1842 ntBASIC3.44□□□□□ -1.86
LDB1Q86U70 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LDB1Q86U70 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LDB1Q86U70 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
LDB1Q86U70 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LDB1Q86U70 RNU6-754P-201ENST00000391166 107 ntBASIC3.44□□□□□ -1.86
LDB1Q86U70 AL021407.1-201ENST00000404531 386 ntBASIC3.44□□□□□ -1.86
LDB1Q86U70 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LDB1Q86U70 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.44□□□□□ -1.86
LDB1Q86U70 AC233728.2-201ENST00000425348 757 ntBASIC3.44□□□□□ -1.86
LDB1Q86U70 MTATP6P4-201ENST00000427725 675 ntBASIC3.44□□□□□ -1.86
LDB1Q86U70 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.44□□□□□ -1.86
LDB1Q86U70 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.44□□□□□ -1.86
LDB1Q86U70 AC073063.1-201ENST00000434352 607 ntBASIC3.44□□□□□ -1.86
LDB1Q86U70 RPL35AP22-201ENST00000436855 335 ntBASIC3.44□□□□□ -1.86
LDB1Q86U70 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.44□□□□□ -1.86
LDB1Q86U70 AL662791.1-201ENST00000441992 928 ntBASIC3.44□□□□□ -1.86
LDB1Q86U70 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LDB1Q86U70 RPS27AP8-201ENST00000452665 445 ntBASIC3.44□□□□□ -1.86
LDB1Q86U70 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.44□□□□□ -1.86
LDB1Q86U70 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.44□□□□□ -1.86
LDB1Q86U70 AC023598.1-201ENST00000472521 361 ntBASIC3.44□□□□□ -1.86
LDB1Q86U70 AC106707.2-201ENST00000484182 374 ntBASIC3.44□□□□□ -1.86
LDB1Q86U70 MIR2276-201ENST00000516886 89 ntBASIC3.44□□□□□ -1.86
LDB1Q86U70 RNU6-798P-201ENST00000516912 103 ntBASIC3.44□□□□□ -1.86
LDB1Q86U70 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.44□□□□□ -1.86
LDB1Q86U70 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.44□□□□□ -1.86
LDB1Q86U70 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.44□□□□□ -1.86
LDB1Q86U70 AC125611.2-201ENST00000551907 647 ntBASIC3.44□□□□□ -1.86
LDB1Q86U70 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.44□□□□□ -1.86
LDB1Q86U70 MIR3158-1-201ENST00000583596 81 ntBASIC3.44□□□□□ -1.86
LDB1Q86U70 AL031775.1-201ENST00000607014 887 ntBASIC3.44□□□□□ -1.86
LDB1Q86U70 AC006133.1-201ENST00000617106 264 ntBASIC3.44□□□□□ -1.86
LDB1Q86U70 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
LDB1Q86U70 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.44□□□□□ -1.86
LDB1Q86U70 MIR4275-201ENST00000636486 87 ntBASIC3.44□□□□□ -1.86
LDB1Q86U70 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LDB1Q86U70 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
LDB1Q86U70 AC092326.2-201ENST00000624772 1561 ntBASIC3.43□□□□□ -1.86
LDB1Q86U70 DEFB108F-201ENST00000344638 222 ntBASIC3.43□□□□□ -1.86
LDB1Q86U70 RNA5SP197-201ENST00000363357 119 ntBASIC3.43□□□□□ -1.86
LDB1Q86U70 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.43□□□□□ -1.86
LDB1Q86U70 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
LDB1Q86U70 RNU6-76P-201ENST00000384060 104 ntBASIC3.43□□□□□ -1.86
LDB1Q86U70 RNU6-809P-201ENST00000384461 107 ntBASIC3.43□□□□□ -1.86
LDB1Q86U70 MTCYBP36-201ENST00000404146 440 ntBASIC3.43□□□□□ -1.86
LDB1Q86U70 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.43□□□□□ -1.86
LDB1Q86U70 CYCSP4-201ENST00000429682 331 ntBASIC3.43□□□□□ -1.86
LDB1Q86U70 HSPD1P21-201ENST00000436541 245 ntBASIC3.43□□□□□ -1.86
LDB1Q86U70 SNORD105B-201ENST00000458770 79 ntBASIC3.43□□□□□ -1.86
LDB1Q86U70 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LDB1Q86U70 AC078785.3-201ENST00000476607 425 ntBASIC3.43□□□□□ -1.86
LDB1Q86U70 AC116337.2-201ENST00000477662 156 ntBASIC3.43□□□□□ -1.86
LDB1Q86U70 AP000797.1-201ENST00000478870 387 ntBASIC3.43□□□□□ -1.86
LDB1Q86U70 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.43□□□□□ -1.86
LDB1Q86U70 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.43□□□□□ -1.86
LDB1Q86U70 AC108860.1-201ENST00000484521 383 ntBASIC3.43□□□□□ -1.86
LDB1Q86U70 RPL21P129-201ENST00000491732 478 ntBASIC3.43□□□□□ -1.86
LDB1Q86U70 AP002812.1-201ENST00000495378 474 ntBASIC3.43□□□□□ -1.86
LDB1Q86U70 HMGB3P15-201ENST00000507326 574 ntBASIC3.43□□□□□ -1.86
LDB1Q86U70 AC026784.1-201ENST00000507986 352 ntBASIC3.43□□□□□ -1.86
LDB1Q86U70 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.43□□□□□ -1.86
LDB1Q86U70 SNORA67.7-201ENST00000516664 135 ntBASIC3.43□□□□□ -1.86
LDB1Q86U70 DEFB108D-201ENST00000527787 222 ntBASIC3.43□□□□□ -1.86
LDB1Q86U70 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.43□□□□□ -1.86
LDB1Q86U70 TGIF1P1-201ENST00000558095 802 ntBASIC3.43□□□□□ -1.86
LDB1Q86U70 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.43□□□□□ -1.86
LDB1Q86U70 AC083760.1-201ENST00000589621 670 ntBASIC3.43□□□□□ -1.86
LDB1Q86U70 AL590229.1-201ENST00000603497 542 ntBASIC3.43□□□□□ -1.86
LDB1Q86U70 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.43□□□□□ -1.86
LDB1Q86U70 RNVU1-4-201ENST00000612985 164 ntBASIC3.43□□□□□ -1.86
LDB1Q86U70 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.43□□□□□ -1.86
LDB1Q86U70 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.43□□□□□ -1.86
LDB1Q86U70 AL159972.1-201ENST00000625150 448 ntBASIC3.43□□□□□ -1.86
LDB1Q86U70 CU459211.1-201ENST00000635667 749 ntBASIC3.43□□□□□ -1.86
LDB1Q86U70 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LDB1Q86U70 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.43□□□□□ -1.86
LDB1Q86U70 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LDB1Q86U70 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LDB1Q86U70 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LDB1Q86U70 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
LDB1Q86U70 AC005832.2-201ENST00000538921 1430 ntBASIC3.43□□□□□ -1.86
LDB1Q86U70 AL161912.2-201ENST00000565707 3007 ntBASIC3.43□□□□□ -1.86
LDB1Q86U70 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LDB1Q86U70 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LDB1Q86U70 AF127577.6-201ENST00000623352 2191 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LDB1Q86U70 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LDB1Q86U70 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.42□□□□□ -1.86
LDB1Q86U70 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LDB1Q86U70 RNU4-35P-201ENST00000362588 141 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 RNU5E-8P-201ENST00000363502 116 ntBASIC3.42□□□□□ -1.86
LDB1Q86U70 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
LDB1Q86U70 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms