Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AL133153.1-201ENST00000557756 303 ntBASIC4.68□□□□□ -1.66
ATG4DQ86TL0 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 AC073410.2-201ENST00000603240 332 ntBASIC4.68□□□□□ -1.66
ATG4DQ86TL0 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 AC064801.1-201ENST00000612025 407 ntBASIC4.68□□□□□ -1.66
ATG4DQ86TL0 MIR7155-201ENST00000615925 56 ntBASIC4.68□□□□□ -1.66
ATG4DQ86TL0 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 AC133552.1-201ENST00000569988 4007 ntBASIC4.68□□□□□ -1.66
ATG4DQ86TL0 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.68□□□□□ -1.66
ATG4DQ86TL0 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4DQ86TL0 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 AC104623.2-202ENST00000623477 4002 ntBASIC4.67□□□□□ -1.66
ATG4DQ86TL0 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 AC097461.1-201ENST00000568928 2821 ntBASIC4.67□□□□□ -1.66
ATG4DQ86TL0 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 RNA5SP507-201ENST00000363603 121 ntBASIC4.67□□□□□ -1.66
ATG4DQ86TL0 Y_RNA.399-201ENST00000383955 105 ntBASIC4.67□□□□□ -1.66
ATG4DQ86TL0 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 AL035079.1-201ENST00000405210 287 ntBASIC4.67□□□□□ -1.66
ATG4DQ86TL0 U3.32-201ENST00000408116 212 ntBASIC4.67□□□□□ -1.66
ATG4DQ86TL0 RNA5SP36-201ENST00000410197 133 ntBASIC4.67□□□□□ -1.66
ATG4DQ86TL0 RNU6-1156P-201ENST00000410365 100 ntBASIC4.67□□□□□ -1.66
ATG4DQ86TL0 AC004383.1-201ENST00000438135 289 ntBASIC4.67□□□□□ -1.66
ATG4DQ86TL0 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 FCF1P4-201ENST00000448326 183 ntBASIC4.67□□□□□ -1.66
ATG4DQ86TL0 RPSAP50-201ENST00000481955 852 ntBASIC4.67□□□□□ -1.66
ATG4DQ86TL0 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 AP001922.4-201ENST00000526967 290 ntBASIC4.67□□□□□ -1.66
ATG4DQ86TL0 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 AC024940.3-201ENST00000538551 316 ntBASIC4.67□□□□□ -1.66
ATG4DQ86TL0 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 AC109446.1-201ENST00000566172 220 ntBASIC4.67□□□□□ -1.66
ATG4DQ86TL0 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 RPL23AP84-201ENST00000571193 464 ntBASIC4.67□□□□□ -1.66
ATG4DQ86TL0 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 AL451044.1-201ENST00000604867 238 ntBASIC4.67□□□□□ -1.66
ATG4DQ86TL0 HMGN2P28-201ENST00000606102 262 ntBASIC4.67□□□□□ -1.66
ATG4DQ86TL0 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.67□□□□□ -1.66
ATG4DQ86TL0 AC091953.5-201ENST00000622919 233 ntBASIC4.67□□□□□ -1.66
ATG4DQ86TL0 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 AC073136.1-201ENST00000449426 2884 ntBASIC4.67□□□□□ -1.66
ATG4DQ86TL0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 AC130650.2-201ENST00000618736 2403 ntBASIC4.67□□□□□ -1.66
ATG4DQ86TL0 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 AC026523.2-201ENST00000625039 7739 ntBASIC4.67□□□□□ -1.66
ATG4DQ86TL0 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4DQ86TL0 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ATG4DQ86TL0 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ATG4DQ86TL0 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ATG4DQ86TL0 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.66□□□□□ -1.66
ATG4DQ86TL0 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.66□□□□□ -1.66
ATG4DQ86TL0 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ATG4DQ86TL0 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ATG4DQ86TL0 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.66□□□□□ -1.66
ATG4DQ86TL0 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
ATG4DQ86TL0 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.66□□□□□ -1.66
ATG4DQ86TL0 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
ATG4DQ86TL0 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.66□□□□□ -1.66
ATG4DQ86TL0 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.66□□□□□ -1.66
ATG4DQ86TL0 AC103710.2-202ENST00000641454 2853 ntBASIC4.66□□□□□ -1.66
ATG4DQ86TL0 Y_RNA.48-201ENST00000362710 103 ntBASIC4.66□□□□□ -1.66
ATG4DQ86TL0 RNU6-48P-201ENST00000384161 107 ntBASIC4.66□□□□□ -1.66
ATG4DQ86TL0 RNU6-393P-201ENST00000384475 107 ntBASIC4.66□□□□□ -1.66
ATG4DQ86TL0 MIR600-201ENST00000385007 98 ntBASIC4.66□□□□□ -1.66
ATG4DQ86TL0 RNU6-293P-201ENST00000411259 106 ntBASIC4.66□□□□□ -1.66
ATG4DQ86TL0 RNU6-387P-201ENST00000411331 105 ntBASIC4.66□□□□□ -1.66
ATG4DQ86TL0 RNA5SP107-201ENST00000411358 122 ntBASIC4.66□□□□□ -1.66
ATG4DQ86TL0 RPL23AP27-201ENST00000415161 451 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms