Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 MTND1P23-201ENST00000416931 372 ntBASIC1.17□□□□□ -2.22
CSMD3Q7Z407 RPL21P2-201ENST00000440049 481 ntBASIC1.17□□□□□ -2.22
CSMD3Q7Z407 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.17□□□□□ -2.22
CSMD3Q7Z407 RPS29P29-201ENST00000456396 171 ntBASIC1.17□□□□□ -2.22
CSMD3Q7Z407 AC079804.2-201ENST00000490376 200 ntBASIC1.17□□□□□ -2.22
CSMD3Q7Z407 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CSMD3Q7Z407 AP001804.3-201ENST00000525146 880 ntBASIC1.17□□□□□ -2.22
CSMD3Q7Z407 AC107294.3-201ENST00000609211 526 ntBASIC1.17□□□□□ -2.22
CSMD3Q7Z407 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CSMD3Q7Z407 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
CSMD3Q7Z407 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
CSMD3Q7Z407 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC1.17□□□□□ -2.22
CSMD3Q7Z407 RPL23AP7-203ENST00000449021 469 ntBASIC1.17□□□□□ -2.22
CSMD3Q7Z407 HMGB3P30-201ENST00000457863 606 ntBASIC1.17□□□□□ -2.22
CSMD3Q7Z407 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.17□□□□□ -2.22
CSMD3Q7Z407 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.17□□□□□ -2.22
CSMD3Q7Z407 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.17□□□□□ -2.22
CSMD3Q7Z407 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC1.17□□□□□ -2.22
CSMD3Q7Z407 ZNF192P1-203ENST00000565888 810 ntBASIC1.17□□□□□ -2.22
CSMD3Q7Z407 RN7SL793P-201ENST00000583259 296 ntBASIC1.17□□□□□ -2.22
CSMD3Q7Z407 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC1.17□□□□□ -2.22
CSMD3Q7Z407 AC009541.1-201ENST00000438279 2662 ntBASIC1.17□□□□□ -2.22
CSMD3Q7Z407 HMGB3P2-201ENST00000411913 584 ntBASIC1.17□□□□□ -2.22
CSMD3Q7Z407 HMGN2P35-201ENST00000412164 270 ntBASIC1.17□□□□□ -2.22
CSMD3Q7Z407 AC007390.1-201ENST00000415722 356 ntBASIC1.17□□□□□ -2.22
CSMD3Q7Z407 HMGB1P45-201ENST00000435986 653 ntBASIC1.17□□□□□ -2.22
CSMD3Q7Z407 AC087190.1-201ENST00000484462 480 ntBASIC1.17□□□□□ -2.22
CSMD3Q7Z407 RNA5SP309-201ENST00000516670 106 ntBASIC1.17□□□□□ -2.22
CSMD3Q7Z407 AC109446.2-201ENST00000567872 497 ntBASIC1.17□□□□□ -2.22
CSMD3Q7Z407 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.17□□□□□ -2.22
CSMD3Q7Z407 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.17□□□□□ -2.22
CSMD3Q7Z407 ZNF876P-202ENST00000398732 1485 ntBASIC1.17□□□□□ -2.22
CSMD3Q7Z407 RNA5SP38-201ENST00000410750 119 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 RNU6-603P-201ENST00000411403 107 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 AC092473.1-201ENST00000441098 221 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 CLIC4P1-201ENST00000453177 535 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC1.16□□□□□ -2.22
CSMD3Q7Z407 SNORA25.15-201ENST00000516487 89 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 RNU6-826P-201ENST00000516827 104 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 COX6CP5-201ENST00000527162 228 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC1.16□□□□□ -2.22
CSMD3Q7Z407 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.16□□□□□ -2.22
CSMD3Q7Z407 AL135786.2-201ENST00000608422 615 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 VIS1.1-201ENST00000610517 203 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CSMD3Q7Z407 AC012150.2-201ENST00000621300 544 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 AC004943.3-201ENST00000624116 600 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CSMD3Q7Z407 SEPT7P7-201ENST00000420492 1301 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC1.16□□□□□ -2.22
CSMD3Q7Z407 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CSMD3Q7Z407 RNU1-42P-201ENST00000364033 160 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 SRIP3-201ENST00000413200 219 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 AC005517.2-201ENST00000424673 553 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.16□□□□□ -2.22
CSMD3Q7Z407 AC092989.1-201ENST00000481235 277 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.16□□□□□ -2.22
CSMD3Q7Z407 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
CSMD3Q7Z407 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CSMD3Q7Z407 CDC27P3-201ENST00000635418 1910 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 AC110792.3-201ENST00000595906 1614 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 RNU6-60P-201ENST00000364792 103 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 MIR591-201ENST00000385290 95 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 PRELID3BP11-201ENST00000414230 479 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 PAICSP7-201ENST00000419829 962 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 AC022022.1-201ENST00000430304 178 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 USP9YP7-201ENST00000436723 430 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.16□□□□□ -2.22
CSMD3Q7Z407 USP9YP32-201ENST00000452432 430 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 OR7L1P-201ENST00000456181 380 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 HMGN1P8-201ENST00000463578 288 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 AC090071.1-201ENST00000507713 644 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC1.16□□□□□ -2.22
CSMD3Q7Z407 AC006270.2-201ENST00000578523 652 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 ABI1P1-201ENST00000603375 1120 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 AL713998.2-201ENST00000604538 1198 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 AC006023.2-201ENST00000609916 167 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 MIR7973-1-201ENST00000614683 76 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 FO624990.1-201ENST00000636373 85 ntBASIC1.16□□□□□ -2.22
CSMD3Q7Z407 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CSMD3Q7Z407 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.15□□□□□ -2.22
CSMD3Q7Z407 RNU4-13P-201ENST00000364019 141 ntBASIC1.15□□□□□ -2.22
CSMD3Q7Z407 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.15□□□□□ -2.22
CSMD3Q7Z407 NEK4P1-201ENST00000433383 879 ntBASIC1.15□□□□□ -2.22
CSMD3Q7Z407 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
CSMD3Q7Z407 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.15□□□□□ -2.22
CSMD3Q7Z407 AC090953.1-201ENST00000604305 1092 ntBASIC1.15□□□□□ -2.22
CSMD3Q7Z407 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.15□□□□□ -2.22
CSMD3Q7Z407 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.15□□□□□ -2.22
CSMD3Q7Z407 OR4G1P-203ENST00000641984 1631 ntBASIC1.15□□□□□ -2.22
CSMD3Q7Z407 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.15□□□□□ -2.23
CSMD3Q7Z407 Z98749.2-208ENST00000381646 500 ntBASIC1.15□□□□□ -2.23
CSMD3Q7Z407 RNY1P4-201ENST00000384595 115 ntBASIC1.15□□□□□ -2.23
CSMD3Q7Z407 XKRYP4-201ENST00000414395 483 ntBASIC1.15□□□□□ -2.23
CSMD3Q7Z407 MTND2P16-201ENST00000419987 799 ntBASIC1.15□□□□□ -2.23
CSMD3Q7Z407 ARF4P2-201ENST00000430209 526 ntBASIC1.15□□□□□ -2.23
CSMD3Q7Z407 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.15□□□□□ -2.23
CSMD3Q7Z407 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC1.15□□□□□ -2.23
CSMD3Q7Z407 XKRYP5-201ENST00000449659 483 ntBASIC1.15□□□□□ -2.23
CSMD3Q7Z407 USP9YP10-201ENST00000454868 628 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms