Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 OR5B10P-201ENST00000532869 642 ntBASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 HMGB1P50-201ENST00000605814 607 ntBASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 AL590282.1-201ENST00000610379 1136 ntBASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 AC019176.2-201ENST00000611579 315 ntBASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 AC025253.1-201ENST00000613623 543 ntBASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 AC015967.1-201ENST00000619893 476 ntBASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 U6.105-201ENST00000637379 88 ntBASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
UBE3BQ7Z3V4 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 AC090337.1-201ENST00000579651 2074 ntBASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 BDP1P-201ENST00000582658 1990 ntBASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 SNORD46.1-201ENST00000364139 104 ntBASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 MIR183-201ENST00000384958 110 ntBASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 RNU6-195P-201ENST00000411352 109 ntBASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 MTND3P17-201ENST00000416968 344 ntBASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 ISCA1P6-201ENST00000427740 390 ntBASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 ARPC3P1-201ENST00000437218 533 ntBASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 HMGB1P31-201ENST00000437242 427 ntBASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 AL121601.2-201ENST00000438019 707 ntBASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 MTCO3P20-201ENST00000454926 688 ntBASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 RPL7P49-201ENST00000471402 708 ntBASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 RN7SL293P-201ENST00000481765 281 ntBASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 RPS3AP14-201ENST00000483907 780 ntBASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 RNF138P1-201ENST00000502765 546 ntBASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 AC093767.1-201ENST00000504523 156 ntBASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 AC110768.1-201ENST00000509222 400 ntBASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 AC008549.1-201ENST00000512900 643 ntBASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 FAM92A1P1-201ENST00000528023 890 ntBASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 HMGB1P33-201ENST00000563485 527 ntBASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 AC009101.1-201ENST00000568135 242 ntBASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 AC010591.1-201ENST00000603941 649 ntBASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 DUXAP9-208ENST00000622815 614 ntBASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 AC091905.1-201ENST00000624400 311 ntBASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
UBE3BQ7Z3V4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 Y_RNA.402-201ENST00000383972 102 ntBASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 RPL31P1-201ENST00000398116 372 ntBASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 RPL31P2-201ENST00000413849 377 ntBASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 MTATP6P27-201ENST00000416987 621 ntBASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 HMGB3P20-201ENST00000417997 600 ntBASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 RPL31P45-201ENST00000419532 356 ntBASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 SAGE2P-201ENST00000420011 2126 ntBASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 AC012065.2-201ENST00000421295 375 ntBASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 CYCSP4-201ENST00000429682 331 ntBASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 AL590233.1-201ENST00000430017 456 ntBASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 RPL21P23-201ENST00000446654 460 ntBASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 AL671855.1-201ENST00000446875 1203 ntBASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 MTND2P24-201ENST00000453434 806 ntBASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 C1DP4-201ENST00000455429 424 ntBASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 AC087312.1-201ENST00000471411 480 ntBASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 AC092989.1-201ENST00000481235 277 ntBASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms