Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AL445669.1-201ENST00000426743 755 ntBASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 AL590383.1-201ENST00000428602 75 ntBASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 AC018644.1-201ENST00000429934 551 ntBASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 AC010655.1-201ENST00000449336 292 ntBASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 MTND1P9-201ENST00000453775 944 ntBASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 OR6K1P-201ENST00000456766 971 ntBASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 AC092798.1-201ENST00000458542 409 ntBASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 BET1P1-201ENST00000482276 359 ntBASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 AC118465.1-201ENST00000513820 1271 ntBASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 RNU6-579P-201ENST00000516879 102 ntBASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 AC013828.2-201ENST00000532487 235 ntBASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 PCMTD1P2-201ENST00000565017 355 ntBASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 AC012435.1-202ENST00000568772 240 ntBASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 AC022146.1-201ENST00000595307 847 ntBASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 KLKP1-201ENST00000595979 403 ntBASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 BCRP9-201ENST00000605312 388 ntBASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 AC022079.1-201ENST00000621546 602 ntBASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 AC092192.1-201ENST00000633154 1018 ntBASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 AL732372.2-225ENST00000642124 456 ntBASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 CR381670.1-201ENST00000624291 1693 ntBASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 AC006378.2-201ENST00000623178 2476 ntBASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 CR383658.2-201ENST00000547576 1525 ntBASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NUP54Q7Z3B4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 AC007496.3-201ENST00000624987 3443 ntBASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 FAM35BP-202ENST00000497389 3337 ntBASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 RPL21P17-201ENST00000397467 475 ntBASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 RPL7P60-201ENST00000397636 735 ntBASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 RNU6-920P-201ENST00000410926 92 ntBASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 RAB9AP3-201ENST00000412737 573 ntBASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 AL356867.1-201ENST00000429623 299 ntBASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 UBE2V1P13-201ENST00000436983 439 ntBASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 AC112653.1-201ENST00000443851 386 ntBASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 RPS3AP46-201ENST00000448352 682 ntBASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 AL133547.1-201ENST00000448546 220 ntBASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 RAB9AP1-201ENST00000449393 573 ntBASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 AL049714.1-201ENST00000466686 347 ntBASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 RNU1-95P-201ENST00000516357 160 ntBASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 RNU1-128P-201ENST00000516704 160 ntBASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 AC093331.1-201ENST00000521474 169 ntBASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 AC008011.1-201ENST00000545989 227 ntBASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 SETP2-201ENST00000553886 926 ntBASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 AC034268.2-201ENST00000571784 482 ntBASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 AC005951.1-201ENST00000576706 485 ntBASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 OR4K8P-201ENST00000578842 1048 ntBASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 AC105224.1-201ENST00000587055 421 ntBASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 AC079089.3-201ENST00000603094 673 ntBASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 AC103710.4-201ENST00000609301 899 ntBASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 AL356266.1-201ENST00000623311 483 ntBASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 AC068057.2-201ENST00000624047 895 ntBASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 MIR4275-201ENST00000636486 87 ntBASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NUP54Q7Z3B4 AC091564.4-201ENST00000533934 2194 ntBASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 AC005832.2-201ENST00000538921 1430 ntBASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms