Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 RPL23AP46-201ENST00000438548 490 ntBASIC3.58□□□□□ -1.84
USP43Q70EL4 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.58□□□□□ -1.84
USP43Q70EL4 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.58□□□□□ -1.84
USP43Q70EL4 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.58□□□□□ -1.84
USP43Q70EL4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.58□□□□□ -1.84
USP43Q70EL4 SNRPFP4-201ENST00000456366 242 ntBASIC3.58□□□□□ -1.84
USP43Q70EL4 SNORA84-201ENST00000459229 133 ntBASIC3.58□□□□□ -1.84
USP43Q70EL4 RPL9P32-201ENST00000464118 620 ntBASIC3.58□□□□□ -1.84
USP43Q70EL4 RPL35P6-201ENST00000490024 372 ntBASIC3.58□□□□□ -1.84
USP43Q70EL4 RPL29P14-201ENST00000495837 428 ntBASIC3.58□□□□□ -1.84
USP43Q70EL4 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.58□□□□□ -1.84
USP43Q70EL4 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.58□□□□□ -1.84
USP43Q70EL4 AC021678.1-201ENST00000505195 936 ntBASIC3.58□□□□□ -1.84
USP43Q70EL4 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
USP43Q70EL4 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.58□□□□□ -1.84
USP43Q70EL4 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.58□□□□□ -1.84
USP43Q70EL4 AC108078.1-201ENST00000508073 725 ntBASIC3.58□□□□□ -1.84
USP43Q70EL4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.58□□□□□ -1.84
USP43Q70EL4 AC009646.1-201ENST00000510455 318 ntBASIC3.58□□□□□ -1.84
USP43Q70EL4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
USP43Q70EL4 SAP18P1-201ENST00000512058 390 ntBASIC3.58□□□□□ -1.84
USP43Q70EL4 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.58□□□□□ -1.84
USP43Q70EL4 MTCO1P30-201ENST00000515244 580 ntBASIC3.58□□□□□ -1.84
USP43Q70EL4 PAICSP4-201ENST00000517543 1253 ntBASIC3.58□□□□□ -1.84
USP43Q70EL4 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.58□□□□□ -1.84
USP43Q70EL4 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.58□□□□□ -1.84
USP43Q70EL4 AF235103.2-201ENST00000525753 346 ntBASIC3.58□□□□□ -1.84
USP43Q70EL4 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.58□□□□□ -1.84
USP43Q70EL4 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.58□□□□□ -1.84
USP43Q70EL4 AC022916.3-201ENST00000592961 742 ntBASIC3.58□□□□□ -1.84
USP43Q70EL4 AC124312.5-201ENST00000604451 268 ntBASIC3.58□□□□□ -1.84
USP43Q70EL4 RNU6-88P-201ENST00000606801 100 ntBASIC3.58□□□□□ -1.84
USP43Q70EL4 AC027807.2-201ENST00000616099 408 ntBASIC3.58□□□□□ -1.84
USP43Q70EL4 AC008121.3-201ENST00000618726 433 ntBASIC3.58□□□□□ -1.84
USP43Q70EL4 AC007792.1-201ENST00000623023 402 ntBASIC3.58□□□□□ -1.84
USP43Q70EL4 AC112484.5-201ENST00000624189 228 ntBASIC3.58□□□□□ -1.84
USP43Q70EL4 AC116563.2-201ENST00000624751 535 ntBASIC3.58□□□□□ -1.84
USP43Q70EL4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
USP43Q70EL4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
USP43Q70EL4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
USP43Q70EL4 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.58□□□□□ -1.84
USP43Q70EL4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.58□□□□□ -1.84
USP43Q70EL4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
USP43Q70EL4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
USP43Q70EL4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
USP43Q70EL4 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
USP43Q70EL4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USP43Q70EL4 SPRR2C-201ENST00000290702 219 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USP43Q70EL4 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
USP43Q70EL4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
USP43Q70EL4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USP43Q70EL4 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
USP43Q70EL4 RNU6-462P-201ENST00000362659 105 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 Y_RNA.142-201ENST00000363491 102 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 SNORD35B-201ENST00000363660 87 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 RNU5E-5P-201ENST00000365379 116 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.57□□□□□ -1.84
USP43Q70EL4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.57□□□□□ -1.84
USP43Q70EL4 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.57□□□□□ -1.84
USP43Q70EL4 Y_RNA.419-201ENST00000384041 102 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 SNORA40.3-201ENST00000390964 122 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USP43Q70EL4 RNU2-6P-201ENST00000411404 190 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.57□□□□□ -1.84
USP43Q70EL4 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.57□□□□□ -1.84
USP43Q70EL4 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.57□□□□□ -1.84
USP43Q70EL4 RPS27AP14-201ENST00000422868 454 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 AL157831.1-201ENST00000426134 473 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 ELOCP14-201ENST00000428070 331 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 AL031663.1-201ENST00000437445 219 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 AL022578.1-201ENST00000439330 1433 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 ELOCP7-201ENST00000439968 331 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.57□□□□□ -1.84
USP43Q70EL4 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.57□□□□□ -1.84
USP43Q70EL4 PDSS1P2-201ENST00000449397 678 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 SLC31A1P1-201ENST00000451221 567 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 RPL26P28-201ENST00000451325 435 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.57□□□□□ -1.84
USP43Q70EL4 NANOGP10-201ENST00000453325 895 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 AL033528.1-201ENST00000453780 140 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.57□□□□□ -1.84
USP43Q70EL4 AC078785.3-201ENST00000476607 425 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 AL132838.2-201ENST00000492041 314 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 AP001086.1-201ENST00000494882 321 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.57□□□□□ -1.84
USP43Q70EL4 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.57□□□□□ -1.84
USP43Q70EL4 AC026427.2-201ENST00000506228 536 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
USP43Q70EL4 AC117529.2-201ENST00000512159 2068 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 LRRC34P2-201ENST00000514850 553 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 RN7SKP82-201ENST00000516786 223 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 OR5BR1P-201ENST00000524992 1330 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 DEFB131D-201ENST00000526803 184 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 OR4A45P-201ENST00000529954 901 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 AC093027.1-201ENST00000546698 429 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 AC093012.1-202ENST00000549403 582 ntBASIC3.57□□□□□ -1.84
USP43Q70EL4 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.57□□□□□ -1.84
USP43Q70EL4 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.57□□□□□ -1.84
USP43Q70EL4 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms