Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 AC068287.1-201ENST00000430283 295 ntBASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 AC022364.2-201ENST00000457963 554 ntBASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 SNRPGP3-201ENST00000469405 227 ntBASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 RPS3AP50-201ENST00000487064 803 ntBASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 AC135721.1-201ENST00000497954 479 ntBASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 AC108475.1-201ENST00000507880 950 ntBASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 OR4R3P-201ENST00000525084 838 ntBASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 AC011979.2-201ENST00000527568 352 ntBASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 HMGB1P6-201ENST00000569046 646 ntBASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 AC069061.3-201ENST00000582254 823 ntBASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 AC012417.1-201ENST00000582307 1039 ntBASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 MIR4480-201ENST00000582492 71 ntBASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 HMGN2P28-201ENST00000606102 262 ntBASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 AC103710.3-201ENST00000608157 948 ntBASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 YWHAEP7-203ENST00000622054 312 ntBASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 AL161637.1-201ENST00000622380 412 ntBASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
PTCHD4Q6ZW05 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 Y_RNA.70-201ENST00000362886 110 ntBASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 RNU6-637P-201ENST00000384050 107 ntBASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 RNU6-432P-201ENST00000384196 109 ntBASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 SNORA3C-201ENST00000408792 125 ntBASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 EI24P1-201ENST00000416584 867 ntBASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 RPL21P112-201ENST00000434403 463 ntBASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 AC016691.1-201ENST00000441321 413 ntBASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 AC114755.5-201ENST00000447760 831 ntBASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 AC006480.1-201ENST00000449887 378 ntBASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 AC234775.1-201ENST00000454247 670 ntBASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 DHFRP3-201ENST00000455595 559 ntBASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 RPL35AP28-201ENST00000459730 331 ntBASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 RPL23AP62-201ENST00000463396 453 ntBASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 AC025465.4-201ENST00000513422 638 ntBASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 RNU6-835P-201ENST00000516974 104 ntBASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 OR5D15P-201ENST00000531671 942 ntBASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 AC006064.5-201ENST00000541782 248 ntBASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 HIF1AP1-201ENST00000553642 175 ntBASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 RPL21P12-201ENST00000559810 515 ntBASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 ZNF192P1-203ENST00000565888 810 ntBASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 NRBF2P5-201ENST00000603087 788 ntBASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 AC006254.3-201ENST00000603353 884 ntBASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 AC079587.1-201ENST00000603846 277 ntBASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 TUG1_1.1-201ENST00000610654 145 ntBASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 AC069234.5-201ENST00000611056 416 ntBASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 AC064801.1-201ENST00000612025 407 ntBASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 AC025253.1-201ENST00000613623 543 ntBASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 AC007546.1-201ENST00000619452 559 ntBASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PTCHD4Q6ZW05 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms