Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 SNRPEP8-201ENST00000442866 260 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 AL136380.1-201ENST00000447970 162 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 RAD23BP3-201ENST00000454157 1152 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 RPL29P14-201ENST00000495837 428 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 RNU6-27P-201ENST00000516146 107 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 SNORA67.7-201ENST00000516664 135 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 SNORA20.3-201ENST00000516880 132 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 IGLV3-26-201ENST00000520756 302 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 AC022616.3-201ENST00000523940 148 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 OR4P1P-201ENST00000530808 1136 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 ADI1P3-201ENST00000549509 470 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 MIR3146-201ENST00000580367 79 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 AC012417.1-201ENST00000582307 1039 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 AC091135.1-201ENST00000585943 307 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 AC008752.3-201ENST00000588113 712 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 AL355812.1-201ENST00000603215 216 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 AL136363.1-201ENST00000605349 337 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 AP001330.5-201ENST00000607176 411 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 AL031666.3-201ENST00000609320 1006 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 AL020991.1-201ENST00000612314 373 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 AC025253.1-201ENST00000613623 543 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 U73479.1-201ENST00000618062 168 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 MIR6500-201ENST00000622700 86 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 C2orf27A-204ENST00000623058 969 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 AC091925.2-201ENST00000625059 256 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 AC009902.3-201ENST00000606235 2172 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 AC011266.1-201ENST00000624119 3569 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 AC011460.1-201ENST00000636268 1834 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 AC068254.2-201ENST00000623938 3577 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 ZNF734P-201ENST00000419494 1534 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 Y_RNA.38-201ENST00000362617 102 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 Y_RNA.381-201ENST00000365666 102 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 RNU6-114P-201ENST00000384704 105 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 Y_RNA.573-201ENST00000384763 105 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 AC068050.1-201ENST00000394891 380 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 AL603766.1-201ENST00000407763 664 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 RNU6ATAC-201ENST00000408749 126 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 RN7SKP177-201ENST00000410567 355 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 AL160275.2-201ENST00000412010 394 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 AL691449.1-201ENST00000426570 421 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 USP9YP7-201ENST00000436723 430 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 MTND3P10-201ENST00000450967 341 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 USP9YP32-201ENST00000452432 430 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 AC133473.1-201ENST00000455173 299 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 RNU6-420P-201ENST00000458780 107 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 RN7SL542P-201ENST00000467147 294 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 RPL23AP41-201ENST00000484754 458 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 AC020893.1-201ENST00000502452 580 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 AC146944.2-203ENST00000502493 354 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms