Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC023141.8-201ENST00000442554 208 ntBASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 AL353691.1-201ENST00000451332 387 ntBASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 CEACAMP6-201ENST00000452007 574 ntBASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 UBA52P7-201ENST00000486088 380 ntBASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 SNORA25.14-201ENST00000516481 132 ntBASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 RNU6-861P-201ENST00000516745 106 ntBASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 AP002392.1-201ENST00000537692 208 ntBASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 AC006272.2-201ENST00000594725 163 ntBASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 AC018445.2-201ENST00000622987 260 ntBASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 AC090740.1-201ENST00000623193 2262 ntBASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
FOXR1Q6PIV2 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 GABPAP-201ENST00000419271 1356 ntBASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 SRRM1P3-201ENST00000426911 2678 ntBASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 HSPA8P4-201ENST00000511877 1920 ntBASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 Y_RNA.16-201ENST00000362421 102 ntBASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 RNU6-1266P-201ENST00000362794 105 ntBASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 RNY1P16-201ENST00000363063 111 ntBASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 SMIM11P1-201ENST00000369586 178 ntBASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 RNU6-946P-201ENST00000383878 107 ntBASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 AL390119.1-201ENST00000440329 312 ntBASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 RPL29P29-201ENST00000448725 423 ntBASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 RN7SL547P-201ENST00000490793 290 ntBASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 AL390726.5-202ENST00000564800 256 ntBASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 MIR4260-201ENST00000583107 67 ntBASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 AL365265.1-201ENST00000621045 234 ntBASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.59□□□□□ -1.51
FOXR1Q6PIV2 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
FOXR1Q6PIV2 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
FOXR1Q6PIV2 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
FOXR1Q6PIV2 AC107021.2-201ENST00000567714 2095 ntBASIC5.59□□□□□ -1.52
FOXR1Q6PIV2 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 AC104623.2-202ENST00000623477 4002 ntBASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 RNU6-81P-201ENST00000365608 104 ntBASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 RNU6-1226P-201ENST00000384317 107 ntBASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 Y_RNA.526-201ENST00000384572 110 ntBASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 RNU6-174P-201ENST00000410406 106 ntBASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 RPL21P24-201ENST00000413752 448 ntBASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 BMS1P17-202ENST00000416720 316 ntBASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 OR2AH1P-201ENST00000425717 928 ntBASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 RPS27P18-201ENST00000431701 247 ntBASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 RPL19P16-201ENST00000433839 588 ntBASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 AZGP1P2-201ENST00000454506 345 ntBASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 AC018437.1-201ENST00000492214 406 ntBASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 AC008958.1-201ENST00000511047 682 ntBASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 IGKV2-23-201ENST00000518729 323 ntBASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 AC012339.2-201ENST00000523996 453 ntBASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 AC104576.1-201ENST00000524225 88 ntBASIC5.58□□□□□ -1.52
FOXR1Q6PIV2 CYCSP27-201ENST00000527643 293 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms