Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC074050.1-201ENST00000563247 211 ntBASIC6.32□□□□□ -1.4
RC3H1Q5TC82 MIR4277-201ENST00000578298 84 ntBASIC6.32□□□□□ -1.4
RC3H1Q5TC82 AL360012.1-201ENST00000602813 131 ntBASIC6.32□□□□□ -1.4
RC3H1Q5TC82 AC004832.4-201ENST00000608952 331 ntBASIC6.32□□□□□ -1.4
RC3H1Q5TC82 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
RC3H1Q5TC82 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
RC3H1Q5TC82 AC027287.1-201ENST00000553115 1453 ntBASIC6.32□□□□□ -1.4
RC3H1Q5TC82 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.32□□□□□ -1.4
RC3H1Q5TC82 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
RC3H1Q5TC82 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RC3H1Q5TC82 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
RC3H1Q5TC82 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
RC3H1Q5TC82 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.31□□□□□ -1.4
RC3H1Q5TC82 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
RC3H1Q5TC82 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RC3H1Q5TC82 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
RC3H1Q5TC82 SCARNA15-201ENST00000607520 4325 ntBASIC6.31□□□□□ -1.4
RC3H1Q5TC82 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
RC3H1Q5TC82 AL359955.1-201ENST00000455242 3275 ntBASIC6.31□□□□□ -1.4
RC3H1Q5TC82 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RC3H1Q5TC82 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
RC3H1Q5TC82 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RC3H1Q5TC82 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.31□□□□□ -1.4
RC3H1Q5TC82 AC107021.2-201ENST00000567714 2095 ntBASIC6.31□□□□□ -1.4
RC3H1Q5TC82 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RC3H1Q5TC82 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.31□□□□□ -1.4
RC3H1Q5TC82 SNORD113.2-201ENST00000364166 89 ntBASIC6.31□□□□□ -1.4
RC3H1Q5TC82 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RC3H1Q5TC82 U3.22-201ENST00000391120 215 ntBASIC6.31□□□□□ -1.4
RC3H1Q5TC82 AL139156.1-201ENST00000412785 841 ntBASIC6.31□□□□□ -1.4
RC3H1Q5TC82 CALM2P2-201ENST00000428512 440 ntBASIC6.31□□□□□ -1.4
RC3H1Q5TC82 RPL7AP49-201ENST00000429522 581 ntBASIC6.31□□□□□ -1.4
RC3H1Q5TC82 AL591438.1-201ENST00000433508 581 ntBASIC6.31□□□□□ -1.4
RC3H1Q5TC82 AL353597.2-202ENST00000434901 373 ntBASIC6.31□□□□□ -1.4
RC3H1Q5TC82 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC6.31□□□□□ -1.4
RC3H1Q5TC82 CYCSP34-201ENST00000458172 304 ntBASIC6.31□□□□□ -1.4
RC3H1Q5TC82 RNU7-59P-201ENST00000459101 61 ntBASIC6.31□□□□□ -1.4
RC3H1Q5TC82 AP001992.1-205ENST00000462248 379 ntBASIC6.31□□□□□ -1.4
RC3H1Q5TC82 AC117503.1-201ENST00000472241 394 ntBASIC6.31□□□□□ -1.4
RC3H1Q5TC82 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC6.31□□□□□ -1.4
RC3H1Q5TC82 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC6.31□□□□□ -1.4
RC3H1Q5TC82 RPL17P19-201ENST00000489069 552 ntBASIC6.31□□□□□ -1.4
RC3H1Q5TC82 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC6.31□□□□□ -1.4
RC3H1Q5TC82 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.31□□□□□ -1.4
RC3H1Q5TC82 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC6.31□□□□□ -1.4
RC3H1Q5TC82 AC067942.3-201ENST00000512025 362 ntBASIC6.31□□□□□ -1.4
RC3H1Q5TC82 RN7SKP96-201ENST00000516948 297 ntBASIC6.31□□□□□ -1.4
RC3H1Q5TC82 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.31□□□□□ -1.4
RC3H1Q5TC82 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.31□□□□□ -1.4
RC3H1Q5TC82 AC006600.1-201ENST00000572529 153 ntBASIC6.31□□□□□ -1.4
RC3H1Q5TC82 AL356218.2-201ENST00000605264 187 ntBASIC6.31□□□□□ -1.4
RC3H1Q5TC82 AL159153.1-201ENST00000619688 317 ntBASIC6.31□□□□□ -1.4
RC3H1Q5TC82 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC6.31□□□□□ -1.4
RC3H1Q5TC82 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RC3H1Q5TC82 AC107081.3-201ENST00000612715 2034 ntBASIC6.31□□□□□ -1.4
RC3H1Q5TC82 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RC3H1Q5TC82 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RC3H1Q5TC82 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.31□□□□□ -1.4
RC3H1Q5TC82 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.31□□□□□ -1.4
RC3H1Q5TC82 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RC3H1Q5TC82 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RC3H1Q5TC82 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RC3H1Q5TC82 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.31□□□□□ -1.4
RC3H1Q5TC82 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RC3H1Q5TC82 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RC3H1Q5TC82 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RC3H1Q5TC82 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
RC3H1Q5TC82 AC139713.2-214ENST00000642059 1811 ntBASIC6.3□□□□□ -1.4
RC3H1Q5TC82 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RC3H1Q5TC82 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RC3H1Q5TC82 SNORA51.11-201ENST00000384442 131 ntBASIC6.3□□□□□ -1.4
RC3H1Q5TC82 MIR129-1-201ENST00000384972 72 ntBASIC6.3□□□□□ -1.4
RC3H1Q5TC82 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RC3H1Q5TC82 SNORA16.2-201ENST00000390991 127 ntBASIC6.3□□□□□ -1.4
RC3H1Q5TC82 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC6.3□□□□□ -1.4
RC3H1Q5TC82 RNU6-1156P-201ENST00000410365 100 ntBASIC6.3□□□□□ -1.4
RC3H1Q5TC82 RNU2-25P-201ENST00000411041 191 ntBASIC6.3□□□□□ -1.4
RC3H1Q5TC82 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.3□□□□□ -1.4
RC3H1Q5TC82 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.3□□□□□ -1.4
RC3H1Q5TC82 AL158071.1-201ENST00000430315 461 ntBASIC6.3□□□□□ -1.4
RC3H1Q5TC82 AC010733.1-201ENST00000451515 401 ntBASIC6.3□□□□□ -1.4
RC3H1Q5TC82 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC6.3□□□□□ -1.4
RC3H1Q5TC82 Y_RNA.644-201ENST00000459006 113 ntBASIC6.3□□□□□ -1.4
RC3H1Q5TC82 AC108471.1-201ENST00000513977 287 ntBASIC6.3□□□□□ -1.4
RC3H1Q5TC82 Y_RNA.674-201ENST00000516362 113 ntBASIC6.3□□□□□ -1.4
RC3H1Q5TC82 HMGN1P28-201ENST00000521340 364 ntBASIC6.3□□□□□ -1.4
RC3H1Q5TC82 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC6.3□□□□□ -1.4
RC3H1Q5TC82 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.3□□□□□ -1.4
RC3H1Q5TC82 AL121576.1-201ENST00000556055 276 ntBASIC6.3□□□□□ -1.4
RC3H1Q5TC82 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.3□□□□□ -1.4
RC3H1Q5TC82 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC6.3□□□□□ -1.4
RC3H1Q5TC82 AC009570.1-201ENST00000609599 745 ntBASIC6.3□□□□□ -1.4
RC3H1Q5TC82 AC064801.1-201ENST00000612025 407 ntBASIC6.3□□□□□ -1.4
RC3H1Q5TC82 AP001282.2-201ENST00000616149 309 ntBASIC6.3□□□□□ -1.4
RC3H1Q5TC82 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.3□□□□□ -1.4
RC3H1Q5TC82 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RC3H1Q5TC82 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.3□□□□□ -1.4
RC3H1Q5TC82 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RC3H1Q5TC82 Z95327.2-201ENST00000414579 1873 ntBASIC6.3□□□□□ -1.4
RC3H1Q5TC82 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms