Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 SNORA25.1-201ENST00000362326 128 ntBASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 RN7SKP124-201ENST00000364730 341 ntBASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 HSPE1P8-201ENST00000406997 288 ntBASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 AC069218.2-201ENST00000411665 344 ntBASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 HMGA1P8-201ENST00000414130 321 ntBASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 AC092809.3-201ENST00000415453 231 ntBASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 RPS23P10-201ENST00000416185 486 ntBASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 MTATP6P4-201ENST00000427725 675 ntBASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 RPL26P6-201ENST00000440913 438 ntBASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 Z92846.1-201ENST00000456203 268 ntBASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 RN7SKP210-201ENST00000459176 261 ntBASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 AC010326.1-201ENST00000462726 602 ntBASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 AC008481.1-201ENST00000463278 396 ntBASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 AL035690.1-201ENST00000490892 383 ntBASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 AC005840.1-201ENST00000498412 377 ntBASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 RN7SKP67-201ENST00000515905 235 ntBASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 AP002001.1-203ENST00000534002 267 ntBASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 IGBP1P1-201ENST00000554337 1009 ntBASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 AL049872.1-201ENST00000556323 322 ntBASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 AC096996.1-201ENST00000563813 325 ntBASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 MIR4260-201ENST00000583107 67 ntBASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 PRPF19P1-201ENST00000584766 898 ntBASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 AC084757.4-201ENST00000616350 526 ntBASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 Y_RNA.778-201ENST00000620203 90 ntBASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 AL031119.1-201ENST00000404707 1879 ntBASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 AC092747.4-201ENST00000620519 1861 ntBASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 AC123769.1-201ENST00000530992 3192 ntBASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 AC233981.2-201ENST00000611524 1614 ntBASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RNFT1Q5M7Z0 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 SNORA63.4-201ENST00000362763 126 ntBASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 RNU6-1056P-201ENST00000383996 107 ntBASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 RNU6-80P-201ENST00000384195 107 ntBASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 Y_RNA.569-201ENST00000384749 103 ntBASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 HSPA8P15-201ENST00000401676 786 ntBASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 Z95327.1-201ENST00000446082 482 ntBASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 RNU6-1037P-201ENST00000459571 107 ntBASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 AC074255.1-201ENST00000511259 501 ntBASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 RNU6-971P-201ENST00000516920 106 ntBASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 CASP1P1-201ENST00000526345 212 ntBASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 FKBP1BP1-201ENST00000553366 325 ntBASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 LRRC37A5P-203ENST00000580181 585 ntBASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 MIR4659A-201ENST00000580269 81 ntBASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 RAD17P1-201ENST00000418130 2042 ntBASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
RNFT1Q5M7Z0 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
RNFT1Q5M7Z0 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
RNFT1Q5M7Z0 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
RNFT1Q5M7Z0 ZNF826P-207ENST00000622273 1910 ntBASIC5.21□□□□□ -1.57
RNFT1Q5M7Z0 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RNFT1Q5M7Z0 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms