Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.38□□□□□ -2.03
RFX7Q2KHR2 AC020923.1-201ENST00000624021 917 ntBASIC2.38□□□□□ -2.03
RFX7Q2KHR2 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.38□□□□□ -2.03
RFX7Q2KHR2 PABPC1P9-201ENST00000426076 1612 ntBASIC2.38□□□□□ -2.03
RFX7Q2KHR2 NSRP1P1-201ENST00000444067 1693 ntBASIC2.38□□□□□ -2.03
RFX7Q2KHR2 AC011460.1-201ENST00000636268 1834 ntBASIC2.38□□□□□ -2.03
RFX7Q2KHR2 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
RFX7Q2KHR2 TOMM22P1-201ENST00000418578 312 ntBASIC2.37□□□□□ -2.03
RFX7Q2KHR2 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.37□□□□□ -2.03
RFX7Q2KHR2 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.37□□□□□ -2.03
RFX7Q2KHR2 AC009237.8-201ENST00000445492 379 ntBASIC2.37□□□□□ -2.03
RFX7Q2KHR2 RPL31P20-201ENST00000449593 360 ntBASIC2.37□□□□□ -2.03
RFX7Q2KHR2 AP001960.1-201ENST00000506494 658 ntBASIC2.37□□□□□ -2.03
RFX7Q2KHR2 CDC42P4-201ENST00000510507 563 ntBASIC2.37□□□□□ -2.03
RFX7Q2KHR2 MTCO1P47-201ENST00000523889 1271 ntBASIC2.37□□□□□ -2.03
RFX7Q2KHR2 AC110588.1-201ENST00000559699 137 ntBASIC2.37□□□□□ -2.03
RFX7Q2KHR2 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.37□□□□□ -2.03
RFX7Q2KHR2 MIR5089-201ENST00000580047 84 ntBASIC2.37□□□□□ -2.03
RFX7Q2KHR2 AC002984.1-201ENST00000591692 448 ntBASIC2.37□□□□□ -2.03
RFX7Q2KHR2 MIR6076-201ENST00000617521 113 ntBASIC2.37□□□□□ -2.03
RFX7Q2KHR2 MTND4P1-201ENST00000457501 1466 ntBASIC2.37□□□□□ -2.03
RFX7Q2KHR2 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RFX7Q2KHR2 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
RFX7Q2KHR2 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RFX7Q2KHR2 RNA5SP391-201ENST00000363456 119 ntBASIC2.36□□□□□ -2.03
RFX7Q2KHR2 RN7SKP226-201ENST00000364912 300 ntBASIC2.36□□□□□ -2.03
RFX7Q2KHR2 SNORD65-201ENST00000391079 73 ntBASIC2.36□□□□□ -2.03
RFX7Q2KHR2 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.36□□□□□ -2.03
RFX7Q2KHR2 AC096533.1-201ENST00000411645 353 ntBASIC2.36□□□□□ -2.03
RFX7Q2KHR2 HMGB3P2-201ENST00000411913 584 ntBASIC2.36□□□□□ -2.03
RFX7Q2KHR2 RPL23AP36-201ENST00000413895 458 ntBASIC2.36□□□□□ -2.03
RFX7Q2KHR2 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.36□□□□□ -2.03
RFX7Q2KHR2 OR51AB1P-201ENST00000429046 620 ntBASIC2.36□□□□□ -2.03
RFX7Q2KHR2 UBE2V1P6-201ENST00000430840 422 ntBASIC2.36□□□□□ -2.03
RFX7Q2KHR2 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RFX7Q2KHR2 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.36□□□□□ -2.03
RFX7Q2KHR2 RPS15AP7-201ENST00000439294 405 ntBASIC2.36□□□□□ -2.03
RFX7Q2KHR2 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.36□□□□□ -2.03
RFX7Q2KHR2 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.36□□□□□ -2.03
RFX7Q2KHR2 OR6C72P-201ENST00000451403 892 ntBASIC2.36□□□□□ -2.03
RFX7Q2KHR2 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.36□□□□□ -2.03
RFX7Q2KHR2 SYPL1P1-201ENST00000473622 768 ntBASIC2.36□□□□□ -2.03
RFX7Q2KHR2 AC025181.1-201ENST00000477507 416 ntBASIC2.36□□□□□ -2.03
RFX7Q2KHR2 MRPL42P6-201ENST00000486397 371 ntBASIC2.36□□□□□ -2.03
RFX7Q2KHR2 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.36□□□□□ -2.03
RFX7Q2KHR2 RNU1-40P-201ENST00000516816 164 ntBASIC2.36□□□□□ -2.03
RFX7Q2KHR2 RNU1-97P-201ENST00000516872 164 ntBASIC2.36□□□□□ -2.03
RFX7Q2KHR2 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.36□□□□□ -2.03
RFX7Q2KHR2 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RFX7Q2KHR2 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.36□□□□□ -2.03
RFX7Q2KHR2 AC023043.2-201ENST00000589678 1026 ntBASIC2.36□□□□□ -2.03
RFX7Q2KHR2 AC092650.2-201ENST00000619984 902 ntBASIC2.36□□□□□ -2.03
RFX7Q2KHR2 RNU6-673P-201ENST00000365084 104 ntBASIC2.36□□□□□ -2.03
RFX7Q2KHR2 RNA5SP138-201ENST00000365098 114 ntBASIC2.36□□□□□ -2.03
RFX7Q2KHR2 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
RFX7Q2KHR2 RNU6-1140P-201ENST00000410517 106 ntBASIC2.36□□□□□ -2.03
RFX7Q2KHR2 NUP35P2-201ENST00000416748 943 ntBASIC2.36□□□□□ -2.03
RFX7Q2KHR2 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.36□□□□□ -2.03
RFX7Q2KHR2 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.36□□□□□ -2.03
RFX7Q2KHR2 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.36□□□□□ -2.03
RFX7Q2KHR2 OR51B8P-201ENST00000449892 769 ntBASIC2.36□□□□□ -2.03
RFX7Q2KHR2 OR52A4P-203ENST00000498233 1014 ntBASIC2.36□□□□□ -2.03
RFX7Q2KHR2 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
RFX7Q2KHR2 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.36□□□□□ -2.03
RFX7Q2KHR2 COX6CP5-201ENST00000527162 228 ntBASIC2.36□□□□□ -2.03
RFX7Q2KHR2 OR4R1P-201ENST00000529879 463 ntBASIC2.36□□□□□ -2.03
RFX7Q2KHR2 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.36□□□□□ -2.03
RFX7Q2KHR2 RPS3AP23-202ENST00000574601 686 ntBASIC2.36□□□□□ -2.03
RFX7Q2KHR2 AC011472.4-201ENST00000615848 491 ntBASIC2.36□□□□□ -2.03
RFX7Q2KHR2 MIR7111-201ENST00000619751 72 ntBASIC2.36□□□□□ -2.03
RFX7Q2KHR2 AC244517.12-201ENST00000623581 663 ntBASIC2.36□□□□□ -2.03
RFX7Q2KHR2 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RFX7Q2KHR2 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.35□□□□□ -2.03
RFX7Q2KHR2 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
RFX7Q2KHR2 AC010733.2-201ENST00000589496 5702 ntBASIC2.35□□□□□ -2.03
RFX7Q2KHR2 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RFX7Q2KHR2 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RFX7Q2KHR2 Y_RNA.226-201ENST00000364337 114 ntBASIC2.35□□□□□ -2.03
RFX7Q2KHR2 RNU6-1251P-201ENST00000364502 107 ntBASIC2.35□□□□□ -2.03
RFX7Q2KHR2 TAS2R15P-201ENST00000390674 928 ntBASIC2.35□□□□□ -2.03
RFX7Q2KHR2 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RFX7Q2KHR2 RNA5SP38-201ENST00000410750 119 ntBASIC2.35□□□□□ -2.03
RFX7Q2KHR2 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.35□□□□□ -2.03
RFX7Q2KHR2 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.35□□□□□ -2.03
RFX7Q2KHR2 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.35□□□□□ -2.03
RFX7Q2KHR2 AC003989.2-201ENST00000440224 169 ntBASIC2.35□□□□□ -2.03
RFX7Q2KHR2 AC234775.1-201ENST00000454247 670 ntBASIC2.35□□□□□ -2.03
RFX7Q2KHR2 MTCYBP14-201ENST00000457471 715 ntBASIC2.35□□□□□ -2.03
RFX7Q2KHR2 AC079804.2-201ENST00000490376 200 ntBASIC2.35□□□□□ -2.03
RFX7Q2KHR2 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.35□□□□□ -2.03
RFX7Q2KHR2 AC108729.3-201ENST00000513484 108 ntBASIC2.35□□□□□ -2.03
RFX7Q2KHR2 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.35□□□□□ -2.03
RFX7Q2KHR2 BNIP3P8-201ENST00000597863 560 ntBASIC2.35□□□□□ -2.03
RFX7Q2KHR2 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.34□□□□□ -2.03
RFX7Q2KHR2 AL359893.1-201ENST00000447628 1580 ntBASIC2.34□□□□□ -2.03
RFX7Q2KHR2 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.03
RFX7Q2KHR2 AL049737.1-201ENST00000413920 1403 ntBASIC2.34□□□□□ -2.03
RFX7Q2KHR2 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
RFX7Q2KHR2 SNORA51.11-201ENST00000384442 131 ntBASIC2.34□□□□□ -2.04
RFX7Q2KHR2 RNU6-14P-201ENST00000384630 106 ntBASIC2.34□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms