Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.12□□□□□ -1.91
SIX1Q15475 RPS15AP38-201ENST00000413110 372 ntBASIC3.12□□□□□ -1.91
SIX1Q15475 RPL23AP39-201ENST00000415533 405 ntBASIC3.12□□□□□ -1.91
SIX1Q15475 AC083875.1-201ENST00000419509 405 ntBASIC3.12□□□□□ -1.91
SIX1Q15475 AC090960.1-201ENST00000421072 306 ntBASIC3.12□□□□□ -1.91
SIX1Q15475 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.12□□□□□ -1.91
SIX1Q15475 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.12□□□□□ -1.91
SIX1Q15475 SETP8-201ENST00000435341 628 ntBASIC3.12□□□□□ -1.91
SIX1Q15475 MTND2P22-201ENST00000444325 1033 ntBASIC3.12□□□□□ -1.91
SIX1Q15475 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.12□□□□□ -1.91
SIX1Q15475 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.12□□□□□ -1.91
SIX1Q15475 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.12□□□□□ -1.91
SIX1Q15475 SUMO2P2-201ENST00000456482 255 ntBASIC3.12□□□□□ -1.91
SIX1Q15475 RPL23AP62-201ENST00000463396 453 ntBASIC3.12□□□□□ -1.91
SIX1Q15475 AP000873.1-201ENST00000463987 400 ntBASIC3.12□□□□□ -1.91
SIX1Q15475 HSPD1P15-201ENST00000505573 1122 ntBASIC3.12□□□□□ -1.91
SIX1Q15475 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.12□□□□□ -1.91
SIX1Q15475 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.12□□□□□ -1.91
SIX1Q15475 Y_RNA.688-201ENST00000516565 95 ntBASIC3.12□□□□□ -1.91
SIX1Q15475 IGKV2-23-201ENST00000518729 323 ntBASIC3.12□□□□□ -1.91
SIX1Q15475 AC022861.1-201ENST00000522981 663 ntBASIC3.12□□□□□ -1.91
SIX1Q15475 AC087276.1-201ENST00000529659 480 ntBASIC3.12□□□□□ -1.91
SIX1Q15475 AP003385.6-201ENST00000531603 374 ntBASIC3.12□□□□□ -1.91
SIX1Q15475 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.12□□□□□ -1.91
SIX1Q15475 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SIX1Q15475 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.12□□□□□ -1.91
SIX1Q15475 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.12□□□□□ -1.91
SIX1Q15475 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.12□□□□□ -1.91
SIX1Q15475 AL669831.4-202ENST00000590817 238 ntBASIC3.12□□□□□ -1.91
SIX1Q15475 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.12□□□□□ -1.91
SIX1Q15475 AC012119.1-201ENST00000603184 222 ntBASIC3.12□□□□□ -1.91
SIX1Q15475 AL355812.1-201ENST00000603215 216 ntBASIC3.12□□□□□ -1.91
SIX1Q15475 MIR8058-201ENST00000615737 89 ntBASIC3.12□□□□□ -1.91
SIX1Q15475 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.12□□□□□ -1.91
SIX1Q15475 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.12□□□□□ -1.91
SIX1Q15475 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.12□□□□□ -1.91
SIX1Q15475 AC004009.2-201ENST00000623016 728 ntBASIC3.12□□□□□ -1.91
SIX1Q15475 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.12□□□□□ -1.91
SIX1Q15475 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.12□□□□□ -1.91
SIX1Q15475 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SIX1Q15475 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SIX1Q15475 DCAF13P1-201ENST00000495256 1330 ntBASIC3.12□□□□□ -1.91
SIX1Q15475 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SIX1Q15475 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.12□□□□□ -1.91
SIX1Q15475 MTND5P3-201ENST00000438536 1800 ntBASIC3.12□□□□□ -1.91
SIX1Q15475 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
SIX1Q15475 AL021368.2-201ENST00000606125 5352 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.11□□□□□ -1.91
SIX1Q15475 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.11□□□□□ -1.91
SIX1Q15475 AL356473.1-201ENST00000406203 1408 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 AL022578.1-201ENST00000439330 1433 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SIX1Q15475 RNU6-989P-201ENST00000362756 107 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 SNORA51.4-201ENST00000364993 124 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 RNU6-723P-201ENST00000383973 107 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 MIR124-3-201ENST00000384866 87 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 RNU6-952P-201ENST00000391164 108 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 RPL7P25-201ENST00000404151 721 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 PSMA6P3-201ENST00000428242 164 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 AL390023.1-201ENST00000428836 262 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 AC005326.1-201ENST00000429197 123 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 ARF4P2-201ENST00000430209 526 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 MUPP-201ENST00000438111 566 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 SNRPEP7-201ENST00000438350 220 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.11□□□□□ -1.91
SIX1Q15475 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.11□□□□□ -1.91
SIX1Q15475 MTND5P14-201ENST00000441481 1267 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 AC005297.2-201ENST00000450430 606 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.11□□□□□ -1.91
SIX1Q15475 BTF3P5-201ENST00000457252 467 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 RPS20P24-201ENST00000457473 361 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 SNORD108-201ENST00000459332 71 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.11□□□□□ -1.91
SIX1Q15475 RN7SL807P-201ENST00000470923 297 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 RPL31P50-201ENST00000471002 296 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 SYPL1P1-201ENST00000473622 768 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 AC072039.1-201ENST00000477611 581 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 AC012170.1-201ENST00000495139 359 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 SNORA74D-201ENST00000516404 141 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.11□□□□□ -1.91
SIX1Q15475 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.11□□□□□ -1.91
SIX1Q15475 OR5G4P-201ENST00000525251 760 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.11□□□□□ -1.91
SIX1Q15475 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.11□□□□□ -1.91
SIX1Q15475 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.11□□□□□ -1.91
SIX1Q15475 DUXAP11-201ENST00000603858 526 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 AL442067.2-201ENST00000614033 363 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 AL357080.1-201ENST00000617394 239 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 AL445264.1-201ENST00000621719 171 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 AC099506.2-201ENST00000623074 221 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 AF246928.1-201ENST00000623768 87 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.11□□□□□ -1.91
SIX1Q15475 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SIX1Q15475 AC012321.1-201ENST00000561622 1588 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 AC097714.1-201ENST00000511272 1647 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SIX1Q15475 AL445523.1-201ENST00000451184 1362 ntBASIC3.11□□□□□ -1.91
SIX1Q15475 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SIX1Q15475 AL133383.2-201ENST00000622958 2336 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms