Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 Y_RNA.512-201ENST00000384518 102 ntBASIC5.07□□□□□ -1.6
PCDH1Q08174 HSPA8P15-201ENST00000401676 786 ntBASIC5.07□□□□□ -1.6
PCDH1Q08174 AC096664.2-201ENST00000411843 406 ntBASIC5.07□□□□□ -1.6
PCDH1Q08174 AC079355.1-201ENST00000421770 223 ntBASIC5.07□□□□□ -1.6
PCDH1Q08174 AL160275.3-201ENST00000423876 471 ntBASIC5.07□□□□□ -1.6
PCDH1Q08174 UBE2V1P4-201ENST00000425374 344 ntBASIC5.07□□□□□ -1.6
PCDH1Q08174 AC016712.1-201ENST00000431088 378 ntBASIC5.07□□□□□ -1.6
PCDH1Q08174 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.07□□□□□ -1.6
PCDH1Q08174 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDH1Q08174 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDH1Q08174 PCNPP5-201ENST00000452246 481 ntBASIC5.07□□□□□ -1.6
PCDH1Q08174 AC002553.2-201ENST00000453217 340 ntBASIC5.07□□□□□ -1.6
PCDH1Q08174 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.07□□□□□ -1.6
PCDH1Q08174 AC068781.1-201ENST00000488231 618 ntBASIC5.07□□□□□ -1.6
PCDH1Q08174 RN7SL184P-201ENST00000488308 297 ntBASIC5.07□□□□□ -1.6
PCDH1Q08174 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDH1Q08174 SLC25A15P5-201ENST00000508033 253 ntBASIC5.07□□□□□ -1.6
PCDH1Q08174 BX510359.5-201ENST00000515651 304 ntBASIC5.07□□□□□ -1.6
PCDH1Q08174 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.07□□□□□ -1.6
PCDH1Q08174 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.07□□□□□ -1.6
PCDH1Q08174 RPL10P14-201ENST00000565265 298 ntBASIC5.07□□□□□ -1.6
PCDH1Q08174 PRPF19P1-201ENST00000584766 898 ntBASIC5.07□□□□□ -1.6
PCDH1Q08174 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDH1Q08174 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PCDH1Q08174 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDH1Q08174 AL109918.3-201ENST00000603072 338 ntBASIC5.07□□□□□ -1.6
PCDH1Q08174 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDH1Q08174 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PCDH1Q08174 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PCDH1Q08174 AC004817.4-201ENST00000602396 3625 ntBASIC5.07□□□□□ -1.6
PCDH1Q08174 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PCDH1Q08174 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDH1Q08174 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDH1Q08174 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDH1Q08174 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDH1Q08174 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDH1Q08174 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
PCDH1Q08174 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PCDH1Q08174 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDH1Q08174 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
PCDH1Q08174 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDH1Q08174 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDH1Q08174 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDH1Q08174 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDH1Q08174 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDH1Q08174 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDH1Q08174 RN7SKP160-201ENST00000363804 340 ntBASIC5.06□□□□□ -1.6
PCDH1Q08174 RNU6-266P-201ENST00000364225 107 ntBASIC5.06□□□□□ -1.6
PCDH1Q08174 RNU6-1026P-201ENST00000384465 108 ntBASIC5.06□□□□□ -1.6
PCDH1Q08174 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDH1Q08174 MRPS18CP6-201ENST00000423587 223 ntBASIC5.06□□□□□ -1.6
PCDH1Q08174 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDH1Q08174 AC004866.2-201ENST00000438285 481 ntBASIC5.06□□□□□ -1.6
PCDH1Q08174 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDH1Q08174 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDH1Q08174 RNU7-138P-201ENST00000459479 64 ntBASIC5.06□□□□□ -1.6
PCDH1Q08174 AP000926.1-201ENST00000479573 241 ntBASIC5.06□□□□□ -1.6
PCDH1Q08174 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDH1Q08174 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDH1Q08174 RNA5SP362-201ENST00000516048 118 ntBASIC5.06□□□□□ -1.6
PCDH1Q08174 RNY3P15-201ENST00000516297 97 ntBASIC5.06□□□□□ -1.6
PCDH1Q08174 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.06□□□□□ -1.6
PCDH1Q08174 AC022790.1-201ENST00000522872 204 ntBASIC5.06□□□□□ -1.6
PCDH1Q08174 AC022616.4-201ENST00000522985 181 ntBASIC5.06□□□□□ -1.6
PCDH1Q08174 HSBP1P1-201ENST00000555205 166 ntBASIC5.06□□□□□ -1.6
PCDH1Q08174 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDH1Q08174 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDH1Q08174 AC002044.1-201ENST00000606707 158 ntBASIC5.06□□□□□ -1.6
PCDH1Q08174 AL021879.1-201ENST00000611756 288 ntBASIC5.06□□□□□ -1.6
PCDH1Q08174 AL450472.3-201ENST00000615578 367 ntBASIC5.06□□□□□ -1.6
PCDH1Q08174 AC118658.2-201ENST00000618697 459 ntBASIC5.06□□□□□ -1.6
PCDH1Q08174 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDH1Q08174 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PCDH1Q08174 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
PCDH1Q08174 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDH1Q08174 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
PCDH1Q08174 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDH1Q08174 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDH1Q08174 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDH1Q08174 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDH1Q08174 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDH1Q08174 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
PCDH1Q08174 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PCDH1Q08174 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCDH1Q08174 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
PCDH1Q08174 AC092747.4-201ENST00000620519 1861 ntBASIC5.05□□□□□ -1.6
PCDH1Q08174 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDH1Q08174 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCDH1Q08174 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDH1Q08174 AC138393.1-203ENST00000327086 343 ntBASIC5.05□□□□□ -1.6
PCDH1Q08174 RNU6-263P-201ENST00000363811 107 ntBASIC5.05□□□□□ -1.6
PCDH1Q08174 RNA5SP90-201ENST00000364801 99 ntBASIC5.05□□□□□ -1.6
PCDH1Q08174 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCDH1Q08174 Y_RNA.480-201ENST00000384364 102 ntBASIC5.05□□□□□ -1.6
PCDH1Q08174 RNU6-14P-201ENST00000384630 106 ntBASIC5.05□□□□□ -1.6
PCDH1Q08174 AL590704.1-201ENST00000402856 794 ntBASIC5.05□□□□□ -1.6
PCDH1Q08174 RPL21P67-201ENST00000402896 478 ntBASIC5.05□□□□□ -1.6
PCDH1Q08174 AL603908.1-201ENST00000406098 201 ntBASIC5.05□□□□□ -1.6
PCDH1Q08174 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDH1Q08174 RNU2-3P-201ENST00000410144 191 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms