Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AP000857.1-201ENST00000532151 543 ntBASIC3.19□□□□□ -1.9
SCN1BQ07699 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.19□□□□□ -1.9
SCN1BQ07699 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.19□□□□□ -1.9
SCN1BQ07699 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.19□□□□□ -1.9
SCN1BQ07699 AC007038.2-201ENST00000608095 740 ntBASIC3.19□□□□□ -1.9
SCN1BQ07699 AC107214.2-201ENST00000608204 634 ntBASIC3.19□□□□□ -1.9
SCN1BQ07699 MIR378J-201ENST00000611988 109 ntBASIC3.19□□□□□ -1.9
SCN1BQ07699 AC022149.2-201ENST00000621061 203 ntBASIC3.19□□□□□ -1.9
SCN1BQ07699 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.19□□□□□ -1.9
SCN1BQ07699 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCN1BQ07699 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SCN1BQ07699 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCN1BQ07699 AC007823.1-201ENST00000569932 1566 ntBASIC3.19□□□□□ -1.9
SCN1BQ07699 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.19□□□□□ -1.9
SCN1BQ07699 AC006378.2-201ENST00000623178 2476 ntBASIC3.19□□□□□ -1.9
SCN1BQ07699 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCN1BQ07699 MAPK10-362ENST00000641864 4484 ntBASIC3.19□□□□□ -1.9
SCN1BQ07699 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCN1BQ07699 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCN1BQ07699 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCN1BQ07699 AC093010.3-201ENST00000570269 15214 ntBASIC3.18□□□□□ -1.9
SCN1BQ07699 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SCN1BQ07699 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SCN1BQ07699 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
SCN1BQ07699 RNA5SP283-201ENST00000365604 119 ntBASIC3.18□□□□□ -1.9
SCN1BQ07699 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SCN1BQ07699 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SCN1BQ07699 AC068533.1-201ENST00000418542 415 ntBASIC3.18□□□□□ -1.9
SCN1BQ07699 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.18□□□□□ -1.9
SCN1BQ07699 AL451054.2-201ENST00000420896 202 ntBASIC3.18□□□□□ -1.9
SCN1BQ07699 AC010099.3-201ENST00000423896 409 ntBASIC3.18□□□□□ -1.9
SCN1BQ07699 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.18□□□□□ -1.9
SCN1BQ07699 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.18□□□□□ -1.9
SCN1BQ07699 LARP1BP3-201ENST00000437229 869 ntBASIC3.18□□□□□ -1.9
SCN1BQ07699 AL008629.1-201ENST00000438615 184 ntBASIC3.18□□□□□ -1.9
SCN1BQ07699 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.18□□□□□ -1.9
SCN1BQ07699 Z82210.1-201ENST00000440037 231 ntBASIC3.18□□□□□ -1.9
SCN1BQ07699 BMI1P1-201ENST00000445879 941 ntBASIC3.18□□□□□ -1.9
SCN1BQ07699 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.18□□□□□ -1.9
SCN1BQ07699 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.18□□□□□ -1.9
SCN1BQ07699 KC877373.1-201ENST00000479066 408 ntBASIC3.18□□□□□ -1.9
SCN1BQ07699 AC092185.1-201ENST00000491371 97 ntBASIC3.18□□□□□ -1.9
SCN1BQ07699 RN7SL323P-201ENST00000494712 295 ntBASIC3.18□□□□□ -1.9
SCN1BQ07699 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.18□□□□□ -1.9
SCN1BQ07699 FTH1P21-201ENST00000512179 511 ntBASIC3.18□□□□□ -1.9
SCN1BQ07699 AC112673.1-201ENST00000513168 575 ntBASIC3.18□□□□□ -1.9
SCN1BQ07699 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.18□□□□□ -1.9
SCN1BQ07699 RNU2-27P-201ENST00000516185 142 ntBASIC3.18□□□□□ -1.9
SCN1BQ07699 RNA5SP164-201ENST00000516533 110 ntBASIC3.18□□□□□ -1.9
SCN1BQ07699 RN7SKP287-201ENST00000516546 266 ntBASIC3.18□□□□□ -1.9
SCN1BQ07699 RNA5SP380-201ENST00000517190 98 ntBASIC3.18□□□□□ -1.9
SCN1BQ07699 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.18□□□□□ -1.9
SCN1BQ07699 AP000907.2-201ENST00000530827 353 ntBASIC3.18□□□□□ -1.9
SCN1BQ07699 TRAV28-201ENST00000557548 323 ntBASIC3.18□□□□□ -1.9
SCN1BQ07699 HMGB1P6-201ENST00000569046 646 ntBASIC3.18□□□□□ -1.9
SCN1BQ07699 AC068135.2-201ENST00000569293 1028 ntBASIC3.18□□□□□ -1.9
SCN1BQ07699 AL590392.1-201ENST00000604960 446 ntBASIC3.18□□□□□ -1.9
SCN1BQ07699 AC093424.1-201ENST00000604999 338 ntBASIC3.18□□□□□ -1.9
SCN1BQ07699 MIR6875-201ENST00000617506 72 ntBASIC3.18□□□□□ -1.9
SCN1BQ07699 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SCN1BQ07699 AC091965.5-201ENST00000624785 342 ntBASIC3.18□□□□□ -1.9
SCN1BQ07699 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.18□□□□□ -1.9
SCN1BQ07699 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.18□□□□□ -1.9
SCN1BQ07699 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SCN1BQ07699 AC104454.1-201ENST00000421341 1401 ntBASIC3.18□□□□□ -1.9
SCN1BQ07699 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SCN1BQ07699 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SCN1BQ07699 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SCN1BQ07699 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SCN1BQ07699 SNORA3.3-201ENST00000408712 125 ntBASIC3.17□□□□□ -1.9
SCN1BQ07699 RPL21P24-201ENST00000413752 448 ntBASIC3.17□□□□□ -1.9
SCN1BQ07699 VPS26BP1-201ENST00000417155 755 ntBASIC3.17□□□□□ -1.9
SCN1BQ07699 AC069157.1-201ENST00000421749 137 ntBASIC3.17□□□□□ -1.9
SCN1BQ07699 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.17□□□□□ -1.9
SCN1BQ07699 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.17□□□□□ -1.9
SCN1BQ07699 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.17□□□□□ -1.9
SCN1BQ07699 BNIP3P2-201ENST00000441221 577 ntBASIC3.17□□□□□ -1.9
SCN1BQ07699 DDX3P2-201ENST00000446138 111 ntBASIC3.17□□□□□ -1.9
SCN1BQ07699 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.17□□□□□ -1.9
SCN1BQ07699 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.17□□□□□ -1.9
SCN1BQ07699 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.17□□□□□ -1.9
SCN1BQ07699 AC021205.2-201ENST00000480069 347 ntBASIC3.17□□□□□ -1.9
SCN1BQ07699 AC006483.1-201ENST00000487308 313 ntBASIC3.17□□□□□ -1.9
SCN1BQ07699 OR2A20P-203ENST00000498397 1268 ntBASIC3.17□□□□□ -1.9
SCN1BQ07699 AC021678.1-201ENST00000505195 936 ntBASIC3.17□□□□□ -1.9
SCN1BQ07699 AC118282.1-201ENST00000506408 765 ntBASIC3.17□□□□□ -1.9
SCN1BQ07699 AC010460.1-201ENST00000507087 466 ntBASIC3.17□□□□□ -1.9
SCN1BQ07699 OR5BM1P-201ENST00000512021 366 ntBASIC3.17□□□□□ -1.9
SCN1BQ07699 RNU6-1282P-201ENST00000516735 96 ntBASIC3.17□□□□□ -1.9
SCN1BQ07699 MIR2116-201ENST00000517221 80 ntBASIC3.17□□□□□ -1.9
SCN1BQ07699 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.17□□□□□ -1.9
SCN1BQ07699 AP006245.1-201ENST00000522549 120 ntBASIC3.17□□□□□ -1.9
SCN1BQ07699 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SCN1BQ07699 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.17□□□□□ -1.9
SCN1BQ07699 PARP1P2-201ENST00000556806 195 ntBASIC3.17□□□□□ -1.9
SCN1BQ07699 AP001004.1-201ENST00000582468 324 ntBASIC3.17□□□□□ -1.9
SCN1BQ07699 AC068790.3-201ENST00000602988 553 ntBASIC3.17□□□□□ -1.9
SCN1BQ07699 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.17□□□□□ -1.9
SCN1BQ07699 AC007671.2-201ENST00000637344 619 ntBASIC3.17□□□□□ -1.9
SCN1BQ07699 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms