Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.03□□□□□ -2.24
HSPG2P98160 AC104435.1-201ENST00000483483 166 ntBASIC1.03□□□□□ -2.24
HSPG2P98160 RNA5SP436-201ENST00000516020 115 ntBASIC1.03□□□□□ -2.24
HSPG2P98160 RNU6-826P-201ENST00000516827 104 ntBASIC1.03□□□□□ -2.24
HSPG2P98160 GLYCAM1-201ENST00000546596 285 ntBASIC1.03□□□□□ -2.24
HSPG2P98160 AC024614.2-201ENST00000577584 372 ntBASIC1.03□□□□□ -2.24
HSPG2P98160 AC006023.2-201ENST00000609916 167 ntBASIC1.03□□□□□ -2.24
HSPG2P98160 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
HSPG2P98160 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
HSPG2P98160 RNA5SP160-201ENST00000364866 120 ntBASIC1.03□□□□□ -2.24
HSPG2P98160 SNORA51.12-201ENST00000384448 134 ntBASIC1.03□□□□□ -2.24
HSPG2P98160 MIR520E-201ENST00000384867 87 ntBASIC1.03□□□□□ -2.24
HSPG2P98160 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
HSPG2P98160 RPL17P12-201ENST00000413391 526 ntBASIC1.03□□□□□ -2.24
HSPG2P98160 COX6CP12-201ENST00000446748 202 ntBASIC1.03□□□□□ -2.24
HSPG2P98160 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC1.03□□□□□ -2.24
HSPG2P98160 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.03□□□□□ -2.24
HSPG2P98160 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC1.03□□□□□ -2.24
HSPG2P98160 RPS3AP23-202ENST00000574601 686 ntBASIC1.03□□□□□ -2.24
HSPG2P98160 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.03□□□□□ -2.24
HSPG2P98160 U73479.1-201ENST00000618062 168 ntBASIC1.03□□□□□ -2.24
HSPG2P98160 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.03□□□□□ -2.24
HSPG2P98160 U8.9-201ENST00000365667 134 ntBASIC1.03□□□□□ -2.25
HSPG2P98160 DNAJC19P6-201ENST00000401853 280 ntBASIC1.03□□□□□ -2.25
HSPG2P98160 RNA5SP181-201ENST00000410246 98 ntBASIC1.03□□□□□ -2.25
HSPG2P98160 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.03□□□□□ -2.25
HSPG2P98160 AC096992.1-201ENST00000459808 709 ntBASIC1.03□□□□□ -2.25
HSPG2P98160 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.03□□□□□ -2.25
HSPG2P98160 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC1.03□□□□□ -2.25
HSPG2P98160 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.03□□□□□ -2.25
HSPG2P98160 AC138649.5-201ENST00000637456 137 ntBASIC1.03□□□□□ -2.25
HSPG2P98160 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.02□□□□□ -2.25
HSPG2P98160 AL035405.1-201ENST00000400795 710 ntBASIC1.02□□□□□ -2.25
HSPG2P98160 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.02□□□□□ -2.25
HSPG2P98160 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
HSPG2P98160 AL138785.1-201ENST00000425821 331 ntBASIC1.02□□□□□ -2.25
HSPG2P98160 USP9YP7-201ENST00000436723 430 ntBASIC1.02□□□□□ -2.25
HSPG2P98160 USP9YP32-201ENST00000452432 430 ntBASIC1.02□□□□□ -2.25
HSPG2P98160 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.02□□□□□ -2.25
HSPG2P98160 OR7L1P-201ENST00000456181 380 ntBASIC1.02□□□□□ -2.25
HSPG2P98160 RPS29P1-201ENST00000465274 159 ntBASIC1.02□□□□□ -2.25
HSPG2P98160 AC008571.1-201ENST00000467232 300 ntBASIC1.02□□□□□ -2.25
HSPG2P98160 SUMO2P6-201ENST00000505273 288 ntBASIC1.02□□□□□ -2.25
HSPG2P98160 MTND4LP22-201ENST00000508209 276 ntBASIC1.02□□□□□ -2.25
HSPG2P98160 AC010265.1-201ENST00000513509 211 ntBASIC1.02□□□□□ -2.25
HSPG2P98160 AC098848.2-201ENST00000588023 330 ntBASIC1.02□□□□□ -2.25
HSPG2P98160 MIR6788-201ENST00000618842 66 ntBASIC1.02□□□□□ -2.25
HSPG2P98160 AP001148.1-201ENST00000624124 2359 ntBASIC1.02□□□□□ -2.25
HSPG2P98160 ICE2P2-201ENST00000483823 2787 ntBASIC1.02□□□□□ -2.25
HSPG2P98160 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
HSPG2P98160 RPL23AP39-201ENST00000415533 405 ntBASIC1.02□□□□□ -2.25
HSPG2P98160 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC1.02□□□□□ -2.25
HSPG2P98160 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.02□□□□□ -2.25
HSPG2P98160 AC068446.3-201ENST00000555285 382 ntBASIC1.02□□□□□ -2.25
HSPG2P98160 AC090751.1-201ENST00000566966 267 ntBASIC1.02□□□□□ -2.25
HSPG2P98160 SNORD53B-201ENST00000577887 78 ntBASIC1.02□□□□□ -2.25
HSPG2P98160 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.02□□□□□ -2.25
HSPG2P98160 CKAP2P1-201ENST00000555477 2049 ntBASIC1.02□□□□□ -2.25
HSPG2P98160 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.02□□□□□ -2.25
HSPG2P98160 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC1.02□□□□□ -2.25
HSPG2P98160 AL354695.1-201ENST00000427935 228 ntBASIC1.02□□□□□ -2.25
HSPG2P98160 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.02□□□□□ -2.25
HSPG2P98160 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
HSPG2P98160 AL359273.1-201ENST00000510918 627 ntBASIC1.02□□□□□ -2.25
HSPG2P98160 Y_RNA.681-201ENST00000516445 113 ntBASIC1.02□□□□□ -2.25
HSPG2P98160 AC107918.3-201ENST00000533272 382 ntBASIC1.02□□□□□ -2.25
HSPG2P98160 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.02□□□□□ -2.25
HSPG2P98160 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
HSPG2P98160 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.01□□□□□ -2.25
HSPG2P98160 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC1.01□□□□□ -2.25
HSPG2P98160 NDUFS5P3-201ENST00000450668 321 ntBASIC1.01□□□□□ -2.25
HSPG2P98160 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.01□□□□□ -2.25
HSPG2P98160 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
HSPG2P98160 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.01□□□□□ -2.25
HSPG2P98160 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
HSPG2P98160 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
HSPG2P98160 AC007256.1-201ENST00000392253 2765 ntBASIC1.01□□□□□ -2.25
HSPG2P98160 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.01□□□□□ -2.25
HSPG2P98160 XIAPP3-201ENST00000312918 795 ntBASIC1.01□□□□□ -2.25
HSPG2P98160 SNORD114-27-201ENST00000363766 70 ntBASIC1.01□□□□□ -2.25
HSPG2P98160 RNA5SP139-201ENST00000364340 117 ntBASIC1.01□□□□□ -2.25
HSPG2P98160 RPL23AP20-201ENST00000447965 421 ntBASIC1.01□□□□□ -2.25
HSPG2P98160 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.01□□□□□ -2.25
HSPG2P98160 MIR365B-201ENST00000362317 111 ntBASIC1.01□□□□□ -2.25
HSPG2P98160 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.01□□□□□ -2.25
HSPG2P98160 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.01□□□□□ -2.25
HSPG2P98160 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC1.01□□□□□ -2.25
HSPG2P98160 AP000926.1-201ENST00000479573 241 ntBASIC1.01□□□□□ -2.25
HSPG2P98160 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.01□□□□□ -2.25
HSPG2P98160 AL391646.1-201ENST00000603860 190 ntBASIC1.01□□□□□ -2.25
HSPG2P98160 MTCO1P6-201ENST00000481192 1384 ntBASIC1.01□□□□□ -2.25
HSPG2P98160 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.01□□□□□ -2.25
HSPG2P98160 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
HSPG2P98160 RNA5SP295-201ENST00000362655 121 ntBASIC1.01□□□□□ -2.25
HSPG2P98160 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.01□□□□□ -2.25
HSPG2P98160 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.01□□□□□ -2.25
HSPG2P98160 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.01□□□□□ -2.25
HSPG2P98160 AC109486.1-201ENST00000486833 374 ntBASIC1.01□□□□□ -2.25
HSPG2P98160 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.01□□□□□ -2.25
HSPG2P98160 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms