Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.97□□□□□ -1.77
SUMO3P55854 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.97□□□□□ -1.77
SUMO3P55854 RNU6-420P-201ENST00000458780 107 ntBASIC3.97□□□□□ -1.77
SUMO3P55854 RNU7-182P-201ENST00000459009 62 ntBASIC3.97□□□□□ -1.77
SUMO3P55854 RNU7-63P-201ENST00000459054 62 ntBASIC3.97□□□□□ -1.77
SUMO3P55854 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.97□□□□□ -1.77
SUMO3P55854 VN1R105P-201ENST00000486595 910 ntBASIC3.97□□□□□ -1.77
SUMO3P55854 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.97□□□□□ -1.77
SUMO3P55854 FAM92A1P2-202ENST00000504766 877 ntBASIC3.97□□□□□ -1.77
SUMO3P55854 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SUMO3P55854 AL359273.1-201ENST00000510918 627 ntBASIC3.97□□□□□ -1.77
SUMO3P55854 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.97□□□□□ -1.77
SUMO3P55854 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.97□□□□□ -1.77
SUMO3P55854 AC105417.1-201ENST00000514691 285 ntBASIC3.97□□□□□ -1.77
SUMO3P55854 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.97□□□□□ -1.77
SUMO3P55854 SNORA40.12-201ENST00000516329 111 ntBASIC3.97□□□□□ -1.77
SUMO3P55854 RN7SKP258-201ENST00000517151 304 ntBASIC3.97□□□□□ -1.77
SUMO3P55854 AC135001.1-201ENST00000544546 283 ntBASIC3.97□□□□□ -1.77
SUMO3P55854 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.97□□□□□ -1.77
SUMO3P55854 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.97□□□□□ -1.77
SUMO3P55854 AC068135.2-201ENST00000569293 1028 ntBASIC3.97□□□□□ -1.77
SUMO3P55854 AC005951.2-201ENST00000576282 495 ntBASIC3.97□□□□□ -1.77
SUMO3P55854 MIR3690-201ENST00000580266 75 ntBASIC3.97□□□□□ -1.77
SUMO3P55854 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.97□□□□□ -1.77
SUMO3P55854 AL356218.2-201ENST00000605264 187 ntBASIC3.97□□□□□ -1.77
SUMO3P55854 AP002826.1-201ENST00000608835 315 ntBASIC3.97□□□□□ -1.77
SUMO3P55854 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.97□□□□□ -1.77
SUMO3P55854 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
SUMO3P55854 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.97□□□□□ -1.77
SUMO3P55854 uc_338.18-201ENST00000615451 175 ntBASIC3.97□□□□□ -1.77
SUMO3P55854 AC002553.4-201ENST00000616896 331 ntBASIC3.97□□□□□ -1.77
SUMO3P55854 AC068831.8-201ENST00000620171 435 ntBASIC3.97□□□□□ -1.77
SUMO3P55854 AC007998.5-201ENST00000622938 237 ntBASIC3.97□□□□□ -1.77
SUMO3P55854 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.97□□□□□ -1.77
SUMO3P55854 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.97□□□□□ -1.77
SUMO3P55854 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.97□□□□□ -1.77
SUMO3P55854 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SUMO3P55854 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SUMO3P55854 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SUMO3P55854 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
SUMO3P55854 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SUMO3P55854 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
SUMO3P55854 PRO1804-201ENST00000623780 2050 ntBASIC3.96□□□□□ -1.77
SUMO3P55854 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SUMO3P55854 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SUMO3P55854 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SUMO3P55854 RNA5SP447-201ENST00000363749 119 ntBASIC3.96□□□□□ -1.78
SUMO3P55854 RNA5SP28-201ENST00000363841 119 ntBASIC3.96□□□□□ -1.78
SUMO3P55854 SMIM11P1-201ENST00000369586 178 ntBASIC3.96□□□□□ -1.78
SUMO3P55854 RN7SKP285-201ENST00000410137 318 ntBASIC3.96□□□□□ -1.78
SUMO3P55854 RN7SKP167-201ENST00000411047 285 ntBASIC3.96□□□□□ -1.78
SUMO3P55854 RN7SKP140-201ENST00000411196 284 ntBASIC3.96□□□□□ -1.78
SUMO3P55854 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.96□□□□□ -1.78
SUMO3P55854 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.96□□□□□ -1.78
SUMO3P55854 AC009480.2-201ENST00000422916 432 ntBASIC3.96□□□□□ -1.78
SUMO3P55854 RPL27AP8-201ENST00000424277 446 ntBASIC3.96□□□□□ -1.78
SUMO3P55854 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.96□□□□□ -1.78
SUMO3P55854 AC122718.1-201ENST00000439448 744 ntBASIC3.96□□□□□ -1.78
SUMO3P55854 AC016691.1-201ENST00000441321 413 ntBASIC3.96□□□□□ -1.78
SUMO3P55854 TXNP1-201ENST00000441872 371 ntBASIC3.96□□□□□ -1.78
SUMO3P55854 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.96□□□□□ -1.78
SUMO3P55854 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.96□□□□□ -1.78
SUMO3P55854 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.96□□□□□ -1.78
SUMO3P55854 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.96□□□□□ -1.78
SUMO3P55854 RPL23AP24-201ENST00000458203 385 ntBASIC3.96□□□□□ -1.78
SUMO3P55854 RPS7P7-201ENST00000463499 571 ntBASIC3.96□□□□□ -1.78
SUMO3P55854 FAM133DP-201ENST00000464802 691 ntBASIC3.96□□□□□ -1.78
SUMO3P55854 MRPS17P3-201ENST00000465453 385 ntBASIC3.96□□□□□ -1.78
SUMO3P55854 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.96□□□□□ -1.78
SUMO3P55854 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.96□□□□□ -1.78
SUMO3P55854 AL592156.1-201ENST00000508758 304 ntBASIC3.96□□□□□ -1.78
SUMO3P55854 RNU2-58P-201ENST00000516403 183 ntBASIC3.96□□□□□ -1.78
SUMO3P55854 IGLVIV-65-201ENST00000517313 360 ntBASIC3.96□□□□□ -1.78
SUMO3P55854 AP006587.4-201ENST00000526053 529 ntBASIC3.96□□□□□ -1.78
SUMO3P55854 PHBP17-201ENST00000528576 541 ntBASIC3.96□□□□□ -1.78
SUMO3P55854 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SUMO3P55854 AC055876.1-202ENST00000567053 138 ntBASIC3.96□□□□□ -1.78
SUMO3P55854 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.96□□□□□ -1.78
SUMO3P55854 MIR4775-201ENST00000581168 75 ntBASIC3.96□□□□□ -1.78
SUMO3P55854 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.96□□□□□ -1.78
SUMO3P55854 AC174048.1-201ENST00000603389 144 ntBASIC3.96□□□□□ -1.78
SUMO3P55854 AP000907.4-201ENST00000604143 237 ntBASIC3.96□□□□□ -1.78
SUMO3P55854 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.96□□□□□ -1.78
SUMO3P55854 AC019278.1-201ENST00000623516 479 ntBASIC3.96□□□□□ -1.78
SUMO3P55854 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.96□□□□□ -1.78
SUMO3P55854 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SUMO3P55854 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SUMO3P55854 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SUMO3P55854 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.96□□□□□ -1.78
SUMO3P55854 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SUMO3P55854 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SUMO3P55854 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SUMO3P55854 AC093536.2-201ENST00000565257 1406 ntBASIC3.95□□□□□ -1.78
SUMO3P55854 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
SUMO3P55854 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SUMO3P55854 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SUMO3P55854 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.95□□□□□ -1.78
SUMO3P55854 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SUMO3P55854 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SUMO3P55854 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms